RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 MRGBPQ9NV56 204 aa18.45■□□□□ 0.54
DDX39A-215ENST00000590696 KLHL21Q9UJP4 597 aa18.45■□□□□ 0.54
DDX39A-215ENST00000590696 ISPDA4D126 451 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 ADH4P08319 380 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 YAP1P46937 504 aaKnown RBP18.44■□□□□ 0.54
DDX39A-215ENST00000590696 COMPP49747 757 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-215ENST00000590696 ARFIP2P53365 341 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 PCBD1P61457 104 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 SLC3A1Q07837 685 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 SF3A3Q12874 501 aaKnown RBP eCLIP18.44■□□□□ 0.549e-6■■□□□ 12.4
DDX39A-215ENST00000590696 MAPRE2Q15555 327 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 OR2T12Q8NG77 320 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 NANPQ8TBE9 248 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 GCDHQ92947 438 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-215ENST00000590696 C4orf45Q96LM5 186 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 JMJD8Q96S16 334 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 VIPAS39Q9H9C1 493 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 ELOVL3Q9HB03 270 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 SAR1AQ9NR31 198 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 GID8Q9NWU2 228 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 UBAP1Q9NZ09 502 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 RHCGQ9UBD6 479 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 CGGBP1Q9UFW8 167 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-215ENST00000590696 ZDHHC8Q9ULC8 765 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 TENM1Q9UKZ4 2725 aa18.44■□□□□ 0.54
DDX39A-215ENST00000590696 TRAV27A0A087WT01 109 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 TMEM89A2RUT3 159 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 H3BSA7 217 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 ICMTO60725 284 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 TROVE2P10155 538 aaKnown RBP eCLIP18.43■□□□□ 0.54
DDX39A-215ENST00000590696 ARHGDIAP52565 204 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 LCN2P80188 198 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 ENDOGQ14249 297 aaKnown RBP18.43■□□□□ 0.54
DDX39A-215ENST00000590696 SPRNQ5BIV9 151 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 FAM205BPQ63HN1 556 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 NRMQ8IXM6 262 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 PCYOX1LQ8NBM8 494 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 GEMIN6Q8WXD5 167 aaKnown RBP18.43■□□□□ 0.54
DDX39A-215ENST00000590696 DIRC2Q96SL1 478 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 SUCNR1Q9BXA5 334 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 C7orf69Q9H7B7 122 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 MSL2Q9HCI7 577 aa18.43■□□□□ 0.54
DDX39A-215ENST00000590696 ELOVL7A1L3X0 281 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 A6NIZ1 184 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 J3KTA2 159 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 SCG5P05408 212 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 MSR1P21757 451 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 GATA3P23771 443 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 RAP1BP61224 184 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 RAP1AP62834 184 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 PRKCDQ05655 676 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 FHL1Q13642 323 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 ARL9Q6T311 187 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 OAFQ86UD1 273 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 C3orf56Q8N813 242 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 LZICQ8WZA0 190 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 SLC6A7Q99884 636 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 FNDC11Q9BVV2 318 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 RBM4Q9BWF3 364 aaKnown RBP18.42■□□□□ 0.54
DDX39A-215ENST00000590696 SNX13Q9Y5W8 968 aa18.42■□□□□ 0.54
DDX39A-215ENST00000590696 C12orf71A8MTZ7 269 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 EFCAB9A8MZ26 197 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 H7C1C5 153 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 TIMM8AO60220 97 aaPredicted RBP18.41■□□□□ 0.54
DDX39A-215ENST00000590696 CD55P08174 381 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 LCN6P62502 163 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 TNFAIP6P98066 277 aaPredicted RBP18.41■□□□□ 0.54
DDX39A-215ENST00000590696 PSG7Q13046 419 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 HNRNPA0Q13151 305 aaKnown RBP18.41■□□□□ 0.54
DDX39A-215ENST00000590696 ANKDD1AQ495B1 522 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 ZMAT1Q5H9K5 638 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 MTX3Q5HYI7 312 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 VTCN1Q7Z7D3 282 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 SYT9Q86SS6 491 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 TREML1Q86YW5 311 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 BPIFB2Q8N4F0 458 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 ST7LQ8TDW4 575 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 POLE4Q9NR33 117 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 MAN2C1Q9NTJ4 1040 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 OPN4Q9UHM6 478 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 NDRG4Q9ULP0 352 aaKnown RBP18.41■□□□□ 0.54
DDX39A-215ENST00000590696 NPTNQ9Y639 398 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 DYSFO75923 2080 aa18.41■□□□□ 0.54
DDX39A-215ENST00000590696 IFNW1P05000 195 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 LIMS1P48059 325 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 TRAM2Q15035 370 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 OFCC1Q8IZS5 231 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 OR13C2Q8NGS9 318 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 DCLRE1CQ96SD1 692 aaKnown RBP18.4■□□□□ 0.54
DDX39A-215ENST00000590696 EMC7Q9NPA0 242 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 FGFR1OP2Q9NVK5 253 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 DCAF16Q9NXF7 216 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 GMPR2Q9P2T1 348 aaKnown RBP18.4■□□□□ 0.54
DDX39A-215ENST00000590696 TANC2Q9HCD6 1990 aa18.4■□□□□ 0.54
DDX39A-215ENST00000590696 FFAR1O14842 300 aa18.39■□□□□ 0.53
DDX39A-215ENST00000590696 ABHD16AO95870 558 aa18.39■□□□□ 0.53
DDX39A-215ENST00000590696 SBK2P0C263 348 aa18.39■□□□□ 0.53
DDX39A-215ENST00000590696 ZFP36P26651 326 aaKnown RBP18.39■□□□□ 0.53
DDX39A-215ENST00000590696 RBMXP38159 391 aaKnown RBP18.39■□□□□ 0.53
DDX39A-215ENST00000590696 SLC9A3P48764 834 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms