RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SPINK2P20155 84 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 RASGEF1BQ0VAM2 473 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 TEX19Q8NA77 164 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 INTS12Q96CB8 462 aaKnown RBP17.6■□□□□ 0.41
TRIM47-204ENST00000587339 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 RCE1Q9Y256 329 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 POLR1DQ9Y2S0 133 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 A0A1B0GTH9 108 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 CYTIPO60759 359 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 CEACAM4O75871 244 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 ITGB2P05107 769 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 GUCA1AP43080 201 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-204ENST00000587339 C16orf87Q6PH81 154 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 COMMD4Q9H0A8 199 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 LDAHQ9H6V9 325 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 EMC7Q9NPA0 242 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 FOXD3Q9UJU5 478 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-204ENST00000587339 A0A1W2PPK0 400 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 TMEM212A6NML5 194 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF254O75437 659 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 NCR1O76036 304 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 ACTL6AO96019 429 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 BCL2A1Q16548 175 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 PHYHD1Q5SRE7 291 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 C10orf128Q5T292 105 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 FDX2Q6P4F2 183 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 DEGS2Q6QHC5 323 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 TPRA1Q86W33 373 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 PRSS35Q8N3Z0 413 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 ABHD3Q8WU67 409 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 CEP19Q96LK0 163 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 DEFB127Q9H1M4 99 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 C1orf198Q9H425 327 aa17.59■□□□□ 0.41
TRIM47-204ENST00000587339 PAQR5Q9NXK6 330 aaPredicted RBP17.59■□□□□ 0.41
TRIM47-204ENST00000587339 A0A087WV48 116 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 OR4C45A6NMZ5 311 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 UCHL1P09936 223 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF133P52736 654 aaPredicted RBP17.58■□□□□ 0.4
TRIM47-204ENST00000587339 RNFT1Q5M7Z0 435 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 BTLAQ7Z6A9 289 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF676Q8N7Q3 588 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 OR2AJ1Q8NGZ0 328 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 RNF133Q8WVZ7 376 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 RGP1Q92546 391 aaPredicted RBP17.58■□□□□ 0.4
TRIM47-204ENST00000587339 PHYHIPQ92561 330 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 C4orf45Q96LM5 186 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 ULBP2Q9BZM5 246 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 EXO5Q9H790 373 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 PALMDQ9NP74 551 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 POLE4Q9NR33 117 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 CENPMQ9NSP4 180 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 UGT2A1Q9Y4X1 527 aa17.58■□□□□ 0.4
TRIM47-204ENST00000587339 AKAP13Q12802 2813 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 DCHS1Q96JQ0 3298 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 TRAV17A0A0B4J275 112 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF879B4DU55 563 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 CCR9P51686 369 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 KCNMB1Q16558 191 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 WDR38Q5JTN6 314 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF544Q6NX49 715 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 UNQ9370/PRO34162Q6UXP9 181 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 AAED1Q7RTV5 226 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.57■□□□□ 0.4
TRIM47-204ENST00000587339 C20orf196Q8IYI0 205 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 HTRA1Q92743 480 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 SLAMF6Q96DU3 332 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 SCNM1Q9BWG6 230 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 ZDHHC11Q9H8X9 412 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 GTF2A1LQ9UNN4 478 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 LIPGQ9Y5X9 500 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 LHFPL6Q9Y693 200 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 TRAV1-2A0A0B4J238 106 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 DHHO43323 396 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 SLC43A1O75387 559 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 PNPP00491 289 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 H2BFMP0C1H6 154 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 SDHBP21912 280 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 CFL1P23528 166 aaKnown RBP17.57■□□□□ 0.4
TRIM47-204ENST00000587339 NTF4P34130 210 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 ZNF45Q02386 682 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 SPANXN2Q5MJ10 180 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 SMAD5Q99717 465 aaKnown RBP17.57■□□□□ 0.4
TRIM47-204ENST00000587339 RBM24Q9BX46 236 aaKnown RBP17.57■□□□□ 0.4
TRIM47-204ENST00000587339 ASH2LQ9UBL3 628 aa17.57■□□□□ 0.4
TRIM47-204ENST00000587339 MCTS1Q9ULC4 181 aaKnown RBP17.57■□□□□ 0.4
TRIM47-204ENST00000587339 TRGV5A0A0B4J1U4 118 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 ACOD1A6NK06 481 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 TAF4O00268 1085 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 SYNGR4O95473 234 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 OCM2P0CE71 109 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 KIR3DL2P43630 455 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 PMP22Q01453 160 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 SGCAQ16586 387 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 ODF4Q2M2E3 257 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 Q499Y3 187 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 HSD17B12Q53GQ0 312 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 NR2C2APQ86WQ0 139 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 LAX1Q8IWV1 398 aa17.56■□□□□ 0.4
TRIM47-204ENST00000587339 SNIP1Q8TAD8 396 aaKnown RBP17.56■□□□□ 0.4
TRIM47-204ENST00000587339 NELFAQ9H3P2 528 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms