RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 RAB43Q86YS6 212 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 PLCZ1Q86YW0 608 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 ZNF486Q96H40 463 aaPredicted RBP9.19□□□□□ -0.94
RFFL-212ENST00000584655 KLHL15Q96M94 604 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 ZNF71Q9NQZ8 489 aaPredicted RBP9.19□□□□□ -0.94
RFFL-212ENST00000584655 POLHQ9Y253 713 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 TLN2Q9Y4G6 2542 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 FZD7O75084 574 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 CD79AP11912 226 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 SRMP19623 302 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 SNTB1Q13884 538 aaKnown RBP9.19□□□□□ -0.94
RFFL-212ENST00000584655 CDK5R1Q15078 307 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 CD163Q86VB7 1156 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 C20orf196Q8IYI0 205 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 CLEC1AQ8NC01 280 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 SYNPRQ8TBG9 265 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 SLITRK2Q9H156 845 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 PPP1R3EQ9H7J1 279 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 RNF121Q9H920 327 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 RCE1Q9Y256 329 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 NOX1Q9Y5S8 564 aa9.19□□□□□ -0.94
RFFL-212ENST00000584655 SLC22A23A1A5C7 686 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 DPM1O60762 260 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 OR2T7P0C7T2 308 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 COX6A1P12074 109 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 IL32P24001 234 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 RIDAP52758 137 aaKnown RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 CLDN15P56746 228 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 IGLV3-21P80748 117 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 MRPL28Q13084 256 aaKnown RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 TPBGQ13641 420 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.94
RFFL-212ENST00000584655 LRRC37A5PQ49AS3 106 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 NKAPLQ5M9Q1 402 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 TMEM201Q5SNT2 666 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 MAMSTRQ6ZN01 415 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 NFAM1Q8NET5 270 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 OR2T27Q8NH04 317 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 UBALD1Q8TB05 177 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 AP3S1Q92572 193 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 SLC35B4Q969S0 331 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 TIMP4Q99727 224 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ATF6BQ99941 703 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 LRFN3Q9BTN0 628 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 FGF20Q9NP95 211 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 DEPPQ9NTK1 212 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 MRPL22Q9NWU5 206 aaKnown RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 DHDHQ9UQ10 334 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 LRP12Q9Y561 859 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 SETD2Q9BYW2 2564 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 A0A0J9YW62 118 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 SLC6A8P48029 635 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 POU4F2Q12837 409 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 LIN54Q6MZP7 749 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 SLC18B1Q6NT16 456 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 TUBA3EQ6PEY2 450 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 CD300LDQ6UXZ3 194 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 ZNF440Q8IYI8 595 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 PLPP5Q8NEB5 264 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 OR2G2Q8NGZ5 317 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ZNF285Q96NJ3 590 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ANKRD19PQ9H560 264 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 PARD6AQ9NPB6 346 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 CSPG4Q6UVK1 2322 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 FAM25EA8MYX2 175 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 MS4A18H0YCH9 400 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 PIN1P1O15428 100 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ITGA5P08648 1049 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ASAH2BP0C7U1 165 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ARFIP1P53367 373 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ATXN7L3Q14CW9 347 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 MS4A18Q3C1V0 323 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 PMM1Q92871 262 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 FAM122AQ96E09 287 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 PRRX2Q99811 253 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 ULBP2Q9BZM5 246 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 SP140LQ9H930 580 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 CRLF2Q9HC73 371 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 RANGRFQ9HD47 186 aaPredicted RBP9.18□□□□□ -0.94
RFFL-212ENST00000584655 TMEM138Q9NPI0 162 aa9.18□□□□□ -0.94
RFFL-212ENST00000584655 FAM230AA0A1W2PPH8 454 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 SSNA1O43805 119 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 OR2T1O43869 369 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 BGLAPP02818 100 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 CD59P13987 128 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 RBMS1P29558 406 aaKnown RBP9.17□□□□□ -0.94
RFFL-212ENST00000584655 CD96P40200 585 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 CARD18P57730 90 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 DCAF7P61962 342 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 TMEM69Q5SWH9 247 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 LINC01590Q5TEZ4 76 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 OPN5Q6U736 354 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 ZNF704Q6ZNC4 412 aaPredicted RBP9.17□□□□□ -0.94
RFFL-212ENST00000584655 TMEM41AQ96HV5 264 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 HIF3AQ9Y2N7 669 aa9.17□□□□□ -0.94
RFFL-212ENST00000584655 SF3B6Q9Y3B4 125 aaKnown RBP9.17□□□□□ -0.94
RFFL-212ENST00000584655 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.942e-6■■□□□ 14.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms