RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 OR1J1Q8NGS3 322 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 POM121L2Q96KW2 1035 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 ERMAPQ96PL5 475 aaPredicted RBP17.53■□□□□ 0.4
SS18-224ENST00000584083 WNT5BQ9H1J7 359 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 SYT4Q9H2B2 425 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 MUC13Q9H3R2 512 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 TAAR3PQ9P1P4 343 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 SONP18583 2426 aaKnown RBP17.53■□□□□ 0.4
SS18-224ENST00000584083 LOC100509620A0A075B734 347 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 KHDRBS3O75525 346 aaKnown RBP17.52■□□□□ 0.4
SS18-224ENST00000584083 KRT36O76013 467 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 STAMBPO95630 424 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 CLPTM1O96005 669 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 SCG5P05408 212 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 NAT2P11245 290 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 FPR3P25089 353 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 SLC6A6P31641 620 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 TRIM25Q14258 630 aaKnown RBP17.52■□□□□ 0.4
SS18-224ENST00000584083 RFX4Q33E94 735 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 ZNF774Q6NX45 483 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 UNQ6126/PRO20091Q6UXV3 157 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 SYT9Q86SS6 491 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 ZNF786Q8N393 782 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 GNPDA2Q8TDQ7 276 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 OR52D1Q9H346 318 aa17.52■□□□□ 0.4
SS18-224ENST00000584083 PRPF19Q9UMS4 504 aaKnown RBP17.52■□□□□ 0.4
SS18-224ENST00000584083 TNFRSF11BO00300 401 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 IMPA2O14732 288 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 TXNDC12O95881 172 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 APEHP13798 732 aaKnown RBP17.51■□□□□ 0.39
SS18-224ENST00000584083 ZNF250P15622 560 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 CDKN2AP42771 156 aaKnown RBP17.51■□□□□ 0.39
SS18-224ENST00000584083 CENPAP49450 140 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 LCN8Q6JVE9 175 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 PTCHD4Q6ZW05 846 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 GLB1L2Q8IW92 636 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 SNX33Q8WV41 574 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 SAMD8Q96LT4 415 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 IFT27Q9BW83 186 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 BPESC1Q9GZL8 116 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 FAM53CQ9NYF3 392 aa17.51■□□□□ 0.39
SS18-224ENST00000584083 VSX1Q9NZR4 365 aaPredicted RBP17.51■□□□□ 0.39
SS18-224ENST00000584083 COA3Q9Y2R0 106 aaPredicted RBP17.51■□□□□ 0.39
SS18-224ENST00000584083 TCRBV5S2A0A599 114 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 A8MV72 311 aaPredicted RBP17.5■□□□□ 0.39
SS18-224ENST00000584083 LYNX1G3V0Z9 82 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 LYNX1P0DP58 116 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 WNT5AP41221 380 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 GSSP48637 474 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 SCRN3Q0VDG4 424 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 CYB5R2Q6BCY4 276 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 C1orf94Q6P1W5 598 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 BCAS4Q8TDM0 211 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 WACQ9BTA9 647 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 NUAK2Q9H093 628 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 MAGIXQ9H6Y5 334 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 HINT3Q9NQE9 182 aaKnown RBP17.5■□□□□ 0.39
SS18-224ENST00000584083 SLCO1C1Q9NYB5 712 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 TAS2R1Q9NYW7 299 aa17.5■□□□□ 0.39
SS18-224ENST00000584083 ABCA2Q9BZC7 2435 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 IGLV3-9A0A075B6K5 115 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 IGHV4-61A0A0C4DH41 118 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 MPZL1O95297 269 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 RENP00797 406 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 GIFP27352 417 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 NOS3P29474 1203 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 GCH1P30793 250 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 HMGA2P52926 109 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 MS4A2Q01362 244 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 TSPAN31Q12999 210 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 MOGQ16653 247 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 ZNF718Q3SXZ3 478 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 FAM98BQ52LJ0 330 aaKnown RBP17.49■□□□□ 0.39
SS18-224ENST00000584083 SPATA46Q5T0L3 261 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 C6orf52Q5T4I8 152 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 OTPQ5XKR4 325 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 PGBD2Q6P3X8 592 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 TMEM154Q6P9G4 183 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 DNM1P34Q6PK57 102 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 JAZF1Q86VZ6 243 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 ZNF101Q8IZC7 436 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 ABHD4Q8TB40 342 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 CCDC124Q96CT7 223 aaKnown RBP17.49■□□□□ 0.39
SS18-224ENST00000584083 CLPTM1LQ96KA5 538 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 LRGUKQ96M69 825 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 THTPAQ9BU02 230 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 NDRG4Q9ULP0 352 aaKnown RBP17.49■□□□□ 0.39
SS18-224ENST00000584083 LYVE1Q9Y5Y7 322 aa17.49■□□□□ 0.39
SS18-224ENST00000584083 SGCEO43556 437 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 DOK2O60496 412 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 CRLF1O75462 422 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 HPXP02790 462 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 MT-ND5P03915 603 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 IGHV4-31P0DP07 118 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 CRABP1P29762 137 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 HTR5AP47898 357 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 GZMKP49863 264 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 GLO1Q04760 184 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 AQP6Q13520 282 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 LEG1Q6P5S2 330 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms