RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 SMARCD1Q96GM5 515 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 ANKRD36BP1Q96IX9 119 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 NPAS2Q99743 824 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 SMYD3Q9H7B4 428 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 CYP3A43Q9HB55 503 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 MARCOQ9UEW3 520 aaPredicted RBP1.96□□□□□ -2.1
COPS3-217ENST00000583160 SCML1Q9UN30 329 aa1.96□□□□□ -2.1
COPS3-217ENST00000583160 ANKRD11Q6UB99 2663 aaPredicted RBP1.96□□□□□ -2.1
COPS3-217ENST00000583160 SMG1Q96Q15 3661 aaKnown RBP1.96□□□□□ -2.1
COPS3-217ENST00000583160 AKAP13Q12802 2813 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 ZFYVE26Q68DK2 2539 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 PLXNA2O75051 1894 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 IGLV11-55A0A075B6I3 123 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 VSTM2BA6NLU5 285 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 IDSB3KWA1 339 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 YKT6O15498 198 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 KLRC4O43908 158 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 TPST2O60704 377 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 MT-ATP6P00846 226 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 IGLV3-27P01718 113 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 TNNC2P02585 160 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 CELP19835 753 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 SYT1P21579 422 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 CXCR2P25025 360 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 ANXA13P27216 316 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 ATP5C1P36542 298 aaKnown RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 PTGFRP43088 359 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 TPMTP51580 245 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 DLX1P56177 255 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 TFAMQ00059 246 aaKnown RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 ILKQ13418 452 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 SNTB2Q13425 540 aaKnown RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 RSPO1Q2MKA7 263 aaPredicted RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 ZCWPW2Q504Y3 356 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 CENPUQ71F23 418 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 SCD5Q86SK9 330 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 TPRA1Q86W33 373 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 TMEM25Q86YD3 366 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 BBS7Q8IWZ6 715 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 CCDC65Q8IXS2 484 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 KIR3DL3Q8N743 410 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 ZNF557Q8N988 423 aaPredicted RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 OR10G3Q8NGC4 313 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 OR9G1Q8NH87 305 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 TCEAL3Q969E4 200 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 AKR1E2Q96JD6 320 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 FCRL1Q96LA6 429 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 XPO6Q96QU8 1125 aaKnown RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 CCNL2Q96S94 520 aaPredicted RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 KCNK16Q96T55 309 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 SLC6A7Q99884 636 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 MRPL45Q9BRJ2 306 aaKnown RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 NUP58Q9BVL2 599 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 ZNF430Q9H8G1 570 aaPredicted RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 ACTR8Q9H981 624 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 CCL28Q9NRJ3 127 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 AGPAT3Q9NRZ7 376 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.95□□□□□ -2.1
COPS3-217ENST00000583160 IL19Q9UHD0 177 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 KIAA1257Q9ULG3 409 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 SCN8AQ9UQD0 1980 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 HELZ2Q9BYK8 2649 aaKnown RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 DSPP15924 2871 aaKnown RBP1.95□□□□□ -2.1
COPS3-217ENST00000583160 TRPM6Q9BX84 2022 aa1.95□□□□□ -2.1
COPS3-217ENST00000583160 ATP8B3O60423 1300 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 RP1P56715 2156 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 A0A1B0GTQ1 180 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 LRRIQ3A6PVS8 624 aaPredicted RBP1.94□□□□□ -2.1
COPS3-217ENST00000583160 A8MXQ7 604 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 H3BQV1 296 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 HCRTO43612 131 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 IGLV3-25P01717 112 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 MUC1P15941 1255 aaPredicted RBP1.94□□□□□ -2.1
COPS3-217ENST00000583160 TNNI1P19237 187 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 CMA1P23946 247 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 LEPP41159 167 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 CXCL5P42830 114 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 KIR2DS4P43632 304 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 VDAC2P45880 294 aaPredicted RBP1.94□□□□□ -2.1
COPS3-217ENST00000583160 MYL6P60660 151 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 TRIP10Q15642 601 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 TMEM183BQ1AE95 376 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 SDHAF4Q5VUM1 108 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 RESP18Q5W5W9 173 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 TMEM215Q68D42 235 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 SYT10Q6XYQ8 523 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 PRSS41Q7RTY9 318 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 ZSCAN30Q86W11 494 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 TMEM183AQ8IXX5 376 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 ARHGAP18Q8N392 663 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 FTMTQ8N4E7 242 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 HDDC3Q8N4P3 179 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 DEFB124Q8NES8 71 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 OR2T3Q8NH03 318 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 DTX3LQ8TDB6 740 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 RLN3Q8WXF3 142 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 FBXO32Q969P5 355 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 ASB9Q96DX5 294 aa1.94□□□□□ -2.1
COPS3-217ENST00000583160 RMI2Q96E14 147 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms