RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 IL5RAQ01344 420 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 SCRN3Q0VDG4 424 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 APOFQ13790 326 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 ENDOGQ14249 297 aaKnown RBP9.09□□□□□ -0.95
CCDC47-203ENST00000580986 C6orf52Q5T4I8 152 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 HIST2H3PS2Q5TEC6 136 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 HIST2H3AQ71DI3 136 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 SHFQ7M4L6 423 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 EGFL6Q8IUX8 553 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 DMRTC2Q8IXT2 367 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-203ENST00000580986 WDR31Q8NA23 367 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF511Q8NB15 262 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 BBS1Q8NFJ9 593 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 OR6K6Q8NGW6 343 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 APH1BQ8WW43 257 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 S100PBPQ96BU1 408 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 MUCL1Q96DR8 90 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 SPOCK3Q9BQ16 436 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 OR51V1Q9H2C8 321 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 KCNN2Q9H2S1 579 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 C1orf198Q9H425 327 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 MED20Q9H944 212 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 SEC61A2Q9H9S3 476 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 NGBQ9NPG2 151 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 PLCXD1Q9NUJ7 323 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 MRPL22Q9NWU5 206 aaKnown RBP9.09□□□□□ -0.95
CCDC47-203ENST00000580986 CLN6Q9NWW5 311 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 CYB5R1Q9UHQ9 305 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 LRRK2Q5S007 2527 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 TUBAL3A6NHL2 446 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 PYCARD-AS1I3L0S3 204 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 M0R129 80 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 CLIC3O95833 236 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 PTHP01270 115 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 IGLV1-44P01699 117 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 RNF224P0DH78 156 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 COX5BP10606 129 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF823P16415 610 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 CDAP32320 146 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 PYCR1P32322 319 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 MTNR1AP48039 350 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 ENTPD1P49961 510 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 CDK5R2Q13319 367 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 PPA1Q15181 289 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 TAB1Q15750 504 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 HIKESHIQ53FT3 197 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 KLHL12Q53G59 568 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 C9orf135Q5VTT2 229 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 SEZ6L2Q6UXD5 910 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 SLC16A14Q7RTX9 510 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 SKA3Q8IX90 412 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 GJC3Q8NFK1 279 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 OR10H5Q8NGA6 315 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 ZNRF4Q8WWF5 429 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 IPCEF1Q8WWN9 437 aaPredicted RBP9.08□□□□□ -0.96
CCDC47-203ENST00000580986 C11orf40Q8WZ69 217 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 UBE2FQ969M7 185 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF75AQ96N20 296 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 INTS14Q96SY0 518 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF416Q9BWM5 594 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 YIPF3Q9GZM5 350 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 RASSF1Q9NS23 344 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 DNAJC27Q9NZQ0 273 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 RPL36Q9Y3U8 105 aaKnown RBP9.08□□□□□ -0.96
CCDC47-203ENST00000580986 PCDHGB1Q9Y5G3 927 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 TIMM10BQ9Y5J6 103 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 TMEM14AQ9Y6G1 99 aa9.08□□□□□ -0.96
CCDC47-203ENST00000580986 SPTBN1Q01082 2364 aaKnown RBP9.08□□□□□ -0.96
CCDC47-203ENST00000580986 ANKHD1Q8IWZ3 2542 aaKnown RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 A0A096LPE4 126 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 A0A1W2PPZ6 126 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 IRGMA1A4Y4 181 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 PHYHO14832 338 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 ENTPD6O75354 484 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 HLA-DQA2P01906 255 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 SCG5P05408 212 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 SBK2P0C263 348 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 CCDC159P0C7I6 412 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 DBTP11182 482 aaKnown RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 PIPP12273 146 aaPredicted RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 CBR1P16152 277 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 SLC15A1P46059 708 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 RPS7P62081 194 aaKnown RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 ADAM8P78325 824 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF91Q05481 1191 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 RAB40BQ12829 278 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 SGCAQ16586 387 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 GSG1Q2KHT4 349 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 SLC18B1Q6NT16 456 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 TMEM53Q6P2H8 277 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 SLC16A9Q7RTY1 509 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 IL17RDQ8NFM7 739 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 OR51L1Q8NGJ5 315 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 OTOSQ8NHW6 89 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 FAM222BQ8WU58 562 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 OTULINQ96BN8 352 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 FBXO17Q96EF6 278 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 MYCBPQ99417 103 aaPredicted RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 CNN2Q99439 309 aaKnown RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 MED18Q9BUE0 208 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms