RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SYT4Q9H2B2 425 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 VCX3AQ9NNX9 186 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 SLC17A5Q9NRA2 495 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 EXOGQ9Y2C4 368 aaKnown RBP13.59□□□□□ -0.23
SS18-216ENST00000580751 SNX5Q9Y5X3 404 aa13.59□□□□□ -0.23
SS18-216ENST00000580751 CRYBG3Q68DQ2 2970 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 PTGES3LE9PB15 166 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 GOSR1O95249 250 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 WNT11O96014 354 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 CDK1P06493 297 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 B4GALT1P15291 398 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 PAX7P23759 505 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 UBE2NP61088 152 aaKnown RBP13.58□□□□□ -0.24
SS18-216ENST00000580751 GLO1Q04760 184 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 APOFQ13790 326 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 PPA1Q15181 289 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 HIKESHIQ53FT3 197 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 ZNF813Q6ZN06 617 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 CCDC36Q8IYA8 594 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 STX19Q8N4C7 294 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
SS18-216ENST00000580751 OTULINQ96BN8 352 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 RNFT2Q96EX2 444 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 ZC3HAV1LQ96H79 300 aaKnown RBP13.58□□□□□ -0.24
SS18-216ENST00000580751 TMEM80Q96HE8 168 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 OR51V1Q9H2C8 321 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 MOV10Q9HCE1 1003 aaKnown RBP13.58□□□□□ -0.24
SS18-216ENST00000580751 NGBQ9NPG2 151 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 RPRD1BQ9NQG5 326 aaKnown RBP13.58□□□□□ -0.24
SS18-216ENST00000580751 TMEM38BQ9NVV0 291 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 AASSQ9UDR5 926 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 DIMT1Q9UNQ2 313 aaKnown RBP13.58□□□□□ -0.24
SS18-216ENST00000580751 B9D1Q9UPM9 204 aa13.58□□□□□ -0.24
SS18-216ENST00000580751 A0A096LPE4 126 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 ARPC4-TTLL3A0A0A6YYG9 625 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 IGLV1-36A0A0B4J1U3 117 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 A0A1W2PPZ6 126 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 CCDC182A6NF36 153 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 KHDRBS3O75525 346 aaKnown RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 SEC14L2O76054 403 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 FARS2O95363 451 aaKnown RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 HRGP04196 525 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 THBDP07204 575 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 NPR2P20594 1047 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 CRYGSP22914 178 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 GUCA1AP43080 201 aaPredicted RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 CAPZA2P47755 286 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 NUDT6P53370 316 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 RPS7P62081 194 aaKnown RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 ACTC1P68032 377 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 ACTA1P68133 377 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 MRPS34P82930 218 aaKnown RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 ST3GAL4Q11206 333 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 KLHL12Q53G59 568 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 SLC25A47Q6Q0C1 308 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 AHSA2Q719I0 299 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 WFDC8Q8IUA0 241 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 OR6V1Q8N148 313 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 PROKR2Q8NFJ6 384 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 OR52N5Q8NH56 324 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 NANOS1Q8WY41 292 aaKnown RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 NSMAFQ92636 917 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 FCGR1BQ92637 280 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 HCAR1Q9BXC0 346 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 NUAK2Q9H093 628 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 NELFAQ9H3P2 528 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 MARCH7Q9H992 704 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 CHCHD3Q9NX63 227 aaKnown RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 EXOSC1Q9Y3B2 195 aaKnown RBP13.57□□□□□ -0.24
SS18-216ENST00000580751 SLC25A15Q9Y619 301 aa13.57□□□□□ -0.24
SS18-216ENST00000580751 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 IGKV1D-43A0A0B4J1Z2 117 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 J3QRE1 110 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 SLC16A7O60669 478 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 RAB36O95755 333 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 CLPTM1O96005 669 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 IGHA1P01876 353 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 SBK2P0C263 348 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 OR2T7P0C7T2 308 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 OR8G3PP0DMU2 310 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 CTLA4P16410 223 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 GSTT1P30711 240 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 ATP6V1E1P36543 226 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 DAZAP2Q15038 168 aaPredicted RBP13.56□□□□□ -0.24
SS18-216ENST00000580751 LINC01590Q5TEZ4 76 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 ALKBH2Q6NS38 261 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 C22orf34Q6ZV56 151 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 BCDIN3DQ7Z5W3 292 aaKnown RBP13.56□□□□□ -0.24
SS18-216ENST00000580751 DPPA2Q7Z7J5 298 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 SLC22A24Q8N4F4 322 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 WDR31Q8NA23 367 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 BBS1Q8NFJ9 593 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 OR2T27Q8NH04 317 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 MARVELD3Q96A59 401 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 LGALS12Q96DT0 336 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 MRPL48Q96GC5 212 aaKnown RBP13.56□□□□□ -0.24
SS18-216ENST00000580751 CNN2Q99439 309 aaKnown RBP13.56□□□□□ -0.24
SS18-216ENST00000580751 MED20Q9H944 212 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 AMBNQ9NP70 447 aa13.56□□□□□ -0.24
SS18-216ENST00000580751 PAK1IP1Q9NWT1 392 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms