RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 ITGB2P05107 769 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 CD80P33681 288 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 CAMK2BQ13554 666 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 KIAA0141Q14154 515 aaPredicted RBP9.46□□□□□ -0.9
PTPRM-205ENST00000577827 ERV3-1Q14264 604 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 SSX2Q16385 188 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 COMMD1Q8N668 190 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 MORN4Q8NDC4 146 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 OR6K3Q8NGY3 331 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 OR14L1PQ8NHC6 308 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 RAB39BQ96DA2 213 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 CDCP1Q9H5V8 836 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 SIRT3Q9NTG7 399 aaPredicted RBP9.46□□□□□ -0.9
PTPRM-205ENST00000577827 SLC23A2Q9UGH3 650 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 ANKRD20A5PA0PJZ0 165 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 B3GALNT1O75752 331 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 APEHP13798 732 aaKnown RBP9.46□□□□□ -0.9
PTPRM-205ENST00000577827 RAC2P15153 192 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 RPA2P15927 270 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 GPR85P60893 370 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 PCBD1P61457 104 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 AKR1C1Q04828 323 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 PLA1AQ53H76 456 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 DMKNQ6E0U4 476 aaPredicted RBP9.46□□□□□ -0.9
PTPRM-205ENST00000577827 ZDHHC22Q8N966 263 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 OR52B4Q8NGK2 314 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 HGDQ93099 445 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 ADGRL4Q9HBW9 690 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 B4GALT7Q9UBV7 327 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 LSM2Q9Y333 95 aaKnown RBP9.46□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF831Q5JPB2 1677 aa9.46□□□□□ -0.9
PTPRM-205ENST00000577827 LY75O60449 1722 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 CNTRLQ7Z7A1 2325 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 A0A0B4J2E0 115 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 A0A1B0GX12 115 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 YY2O15391 372 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 FCGR2AP12318 317 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF44P15621 663 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 MVDP53602 400 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 MTCP1P56278 107 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 GRB2P62993 217 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 PLGLB1Q02325 96 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 MELKQ14680 651 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF74Q16587 644 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 OR13C8Q8NGS7 320 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 BCL7CQ8WUZ0 217 aaPredicted RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 KCNJ15Q99712 375 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 PAPOLGQ9BWT3 736 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 MBNL1Q9NR56 388 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ADAMTSL1Q8N6G6 1762 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ST8SIA3O43173 380 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 GABREP78334 506 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 MRPS21P82921 87 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 RPL18Q07020 188 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 HIST2H3PS2Q5TEC6 136 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 TMEM81Q6P7N7 255 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 H1FNTQ75WM6 255 aaPredicted RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 SSX9Q7RTT3 188 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 P4HA3Q7Z4N8 544 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 C2orf50Q96LR7 162 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 LAT2Q9GZY6 243 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF768Q9H5H4 540 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 FGF22Q9HCT0 170 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 RPH3AQ9Y2J0 694 aaPredicted RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 KCNE3Q9Y6H6 103 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF749O43361 778 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 IL33O95760 270 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 EPHA4P54764 986 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 CDONQ4KMG0 1287 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 FAM74A1Q5RGS3 127 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ANKRD16Q6P6B7 361 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 DOK3Q7L591 496 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 LINC00346Q8IVM7 164 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 OR56B2PQ8NGI1 322 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 MR1Q95460 341 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 NXPE3Q969Y0 559 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 S1PR5Q9H228 398 aa9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF223Q9UK11 482 aaPredicted RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF346Q9UL40 294 aaKnown RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 COA3Q9Y2R0 106 aaPredicted RBP9.45□□□□□ -0.9
PTPRM-205ENST00000577827 DFFBO76075 338 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 MAT1AQ00266 395 aaKnown RBP9.44□□□□□ -0.9
PTPRM-205ENST00000577827 RIN1Q13671 783 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 COL9A2Q14055 689 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-205ENST00000577827 LAIR2Q6ISS4 152 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 NPSR1Q6W5P4 371 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 MKXQ8IYA7 352 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 ARRDC1Q8N5I2 433 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 HSD17B11Q8NBQ5 300 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 PHOSPHO2Q8TCD6 241 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 CPNE4Q96A23 557 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-205ENST00000577827 RBMXL1Q96E39 390 aaKnown RBP9.44□□□□□ -0.9
PTPRM-205ENST00000577827 ELF4Q99607 663 aaPredicted RBP9.44□□□□□ -0.9
PTPRM-205ENST00000577827 PTDSS2Q9BVG9 487 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 NECAP2Q9NVZ3 263 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 KLF15Q9UIH9 416 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 ACAD8Q9UKU7 415 aa9.44□□□□□ -0.9
PTPRM-205ENST00000577827 R4GMQ9 66 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms