RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SYT4Q9H2B2 425 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 PLEKHF2Q9H8W4 249 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 RASD1Q9Y272 281 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 GSTK1Q9Y2Q3 226 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 FKBP7Q9Y680 259 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 MPDZO75970 2070 aa9.01□□□□□ -0.97
SS18-207ENST00000577636 ZNF726A6NNF4 738 aa9□□□□□ -0.97
SS18-207ENST00000577636 AHRRA9YTQ3 701 aa9□□□□□ -0.97
SS18-207ENST00000577636 H7C1C5 153 aa9□□□□□ -0.97
SS18-207ENST00000577636 H7C1Q1 480 aa9□□□□□ -0.97
SS18-207ENST00000577636 J3QLW9 94 aa9□□□□□ -0.97
SS18-207ENST00000577636 J3QRE1 110 aa9□□□□□ -0.97
SS18-207ENST00000577636 SLC16A7O60669 478 aa9□□□□□ -0.97
SS18-207ENST00000577636 HLA-DPB1P04440 258 aa9□□□□□ -0.97
SS18-207ENST00000577636 IFNGR1P15260 489 aa9□□□□□ -0.97
SS18-207ENST00000577636 ZNF19P17023 458 aa9□□□□□ -0.97
SS18-207ENST00000577636 ZNF182P17025 639 aaPredicted RBP9□□□□□ -0.97
SS18-207ENST00000577636 ZNF43P17038 809 aa9□□□□□ -0.97
SS18-207ENST00000577636 CD53P19397 219 aa9□□□□□ -0.97
SS18-207ENST00000577636 IL11P20809 199 aa9□□□□□ -0.97
SS18-207ENST00000577636 PAX7P23759 505 aa9□□□□□ -0.97
SS18-207ENST00000577636 GABRA5P31644 462 aa9□□□□□ -0.97
SS18-207ENST00000577636 UGT2B10P36537 528 aa9□□□□□ -0.97
SS18-207ENST00000577636 NAA10P41227 235 aaPredicted RBP9□□□□□ -0.97
SS18-207ENST00000577636 CLRN1P58418 232 aa9□□□□□ -0.97
SS18-207ENST00000577636 LCN6P62502 163 aa9□□□□□ -0.97
SS18-207ENST00000577636 GLO1Q04760 184 aa9□□□□□ -0.97
SS18-207ENST00000577636 MRPL28Q13084 256 aaKnown RBP9□□□□□ -0.97
SS18-207ENST00000577636 SPCS2Q15005 226 aa9□□□□□ -0.97
SS18-207ENST00000577636 HYAL4Q2M3T9 481 aa9□□□□□ -0.97
SS18-207ENST00000577636 EEF1A1P5Q5VTE0 462 aa9□□□□□ -0.97
SS18-207ENST00000577636 KCTD20Q7Z5Y7 419 aa9□□□□□ -0.97
SS18-207ENST00000577636 GPAT4Q86UL3 456 aa9□□□□□ -0.97
SS18-207ENST00000577636 KLBQ86Z14 1044 aa9□□□□□ -0.97
SS18-207ENST00000577636 PHC2Q8IXK0 858 aa9□□□□□ -0.97
SS18-207ENST00000577636 PM20D2Q8IYS1 436 aa9□□□□□ -0.97
SS18-207ENST00000577636 NEIL3Q8TAT5 605 aa9□□□□□ -0.97
SS18-207ENST00000577636 ZNF519Q8TB69 540 aa9□□□□□ -0.97
SS18-207ENST00000577636 NTNG2Q96CW9 530 aa9□□□□□ -0.97
SS18-207ENST00000577636 ADAD1Q96M93 576 aaKnown RBP9□□□□□ -0.97
SS18-207ENST00000577636 KLHL15Q96M94 604 aa9□□□□□ -0.97
SS18-207ENST00000577636 OXGR1Q96P68 337 aa9□□□□□ -0.97
SS18-207ENST00000577636 TRIB1Q96RU8 372 aa9□□□□□ -0.97
SS18-207ENST00000577636 INTS14Q96SY0 518 aa9□□□□□ -0.97
SS18-207ENST00000577636 DDOQ99489 341 aa9□□□□□ -0.97
SS18-207ENST00000577636 NPAS1Q99742 590 aa9□□□□□ -0.97
SS18-207ENST00000577636 DCSTAMPQ9H295 470 aa9□□□□□ -0.97
SS18-207ENST00000577636 PROK2Q9HC23 129 aa9□□□□□ -0.97
SS18-207ENST00000577636 FANCFQ9NPI8 374 aa9□□□□□ -0.97
SS18-207ENST00000577636 BEX4Q9NWD9 120 aaPredicted RBP9□□□□□ -0.97
SS18-207ENST00000577636 VSX1Q9NZR4 365 aaPredicted RBP9□□□□□ -0.97
SS18-207ENST00000577636 ZNF629Q9UEG4 869 aaPredicted RBP9□□□□□ -0.97
SS18-207ENST00000577636 LAMP5Q9UJQ1 280 aa9□□□□□ -0.97
SS18-207ENST00000577636 FOXD3Q9UJU5 478 aaPredicted RBP9□□□□□ -0.97
SS18-207ENST00000577636 CAMK2AQ9UQM7 478 aa9□□□□□ -0.97
SS18-207ENST00000577636 EML6Q6ZMW3 1958 aa9□□□□□ -0.97
SS18-207ENST00000577636 MAP1AP78559 2803 aaPredicted RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 LOC102725191A0A1B0GVB3 256 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 A0A1W2PNR3 127 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 A0A1W2PQL4 384 aaPredicted RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 SLC22A23A1A5C7 686 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 AQP7P3A6NL99 342 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 B4DXG7 233 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 MS4A18H0YCH9 400 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 CASKO14936 926 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 EFNA2O43921 213 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ZIC3O60481 467 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 TMCC2O75069 709 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 SERPINA3P01011 423 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 IGHG1P01857 330 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 OPN1LWP04000 364 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 KRT8P05787 483 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ADRA2AP08913 450 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ZNF823P16415 610 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 CELP19835 753 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 CEACAM8P31997 349 aaPredicted RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 PYCR1P32322 319 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 TIMP3P35625 211 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 RPS3AP61247 264 aaKnown RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 NCS1P62166 190 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 RUNX1T1Q06455 604 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 MELKQ14680 651 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 MS4A18Q3C1V0 323 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 Q5PR19 223 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ZNF544Q6NX49 715 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 LUZP2Q86TE4 346 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 YRDCQ86U90 279 aaKnown RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 KRTAP1-3Q8IUG1 177 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 NDNFQ8TB73 568 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ZPLD1Q8TCW7 415 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ASB10Q8WXI3 467 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ASB17Q8WXJ9 295 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 NANOS1Q8WY41 292 aaKnown RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 RPL3LQ92901 407 aaKnown RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 C4orf36Q96KX1 117 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 Q96MF0 132 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 TIMP4Q99727 224 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 OR2B2Q9GZK3 357 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms