RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 Q6ZR03 302 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 HIST3H2AQ7L7L0 130 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 MAVSQ7Z434 540 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 ZER1Q7Z7L7 766 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 TSPYL5Q86VY4 417 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 POU5F2Q8N7G0 328 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 SMYD1Q8NB12 490 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 NOXO1Q8NFA2 376 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR6T1Q8NGN1 323 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 ABHD4Q8TB40 342 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 ADAMTS16Q8TE57 1224 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 AENQ8WTP8 325 aaKnown RBP8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 RAB40AQ8WXH6 277 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 ASB10Q8WXI3 467 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 HIST1H2ACQ93077 130 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 C4orf45Q96LM5 186 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR52B2Q96RD2 323 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 RBM4BQ9BQ04 359 aaKnown RBP8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 WNT5BQ9H1J7 359 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 IKZF5Q9H5V7 419 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 SMURF2Q9HAU4 748 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 MEPEQ9NQ76 525 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 VAPAQ9P0L0 249 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 IL19Q9UHD0 177 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 SLC13A4Q9UKG4 626 aa8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 KMT2CQ8NEZ4 4911 aaKnown RBP8.35□□□□□ -1.07
CALCOCO2-227ENST00000575560 TRBV5-3A0A0A0MS03 114 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 IGKV1D-43A0A0B4J1Z2 117 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 TRAV40A0A0B4J280 105 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 KIR2DS1A0A191URI9 304 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 A0A1W2PRG6 482 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 CPSF4LA6NMK7 179 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 TMEM178BH3BS89 294 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 RGS16O15492 202 aaPredicted RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 TIMM8AO60220 97 aaPredicted RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 SLC2A10O95528 541 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 F13BP05160 661 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 CRYBA1P05813 215 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 TSPAN19P0C672 248 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 PPIBP23284 216 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 AQP1P29972 269 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 MRPL19P49406 292 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 PCBP3P57721 371 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 BPIFB3P59826 476 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 ERVK-25P63136 954 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 SGCAQ16586 387 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 KRT71Q3SY84 523 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 ARMC4Q5T2S8 1044 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 FIP1L1Q6UN15 594 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 BTNL3Q6UXE8 466 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 Q6YL49 198 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 RBM45Q8IUH3 476 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 FUNDC1Q8IVP5 155 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 ALDH16A1Q8IZ83 802 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR2Z1Q8NG97 314 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 GPR32P1Q8NGA4 272 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR4D11Q8NGI4 311 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR10S1Q8NGN2 331 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 MPP4Q96JB8 637 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 PRSS27Q9BQR3 290 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 SSBP3Q9BWW4 388 aaPredicted RBP8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 OR2H1Q9GZK4 316 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 NANOGQ9H9S0 305 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 ELOVL3Q9HB03 270 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 TMEM165Q9HC07 324 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 KCNK9Q9NPC2 374 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 MAN2C1Q9NTJ4 1040 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 PPP1R3CQ9UQK1 317 aa8.34□□□□□ -1.07
CALCOCO2-227ENST00000575560 TRAPPC13A5PLN9 417 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 NPIPB13A6NJU9 1138 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 NPIPB4C9JG80 1138 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 KPNA4O00629 521 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 CLPXO76031 633 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 TGDSO95455 350 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 FSTL3O95633 263 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 CST2P09228 141 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 UMPSP11172 480 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 KITLGP21583 273 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 TUBG1P23258 451 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 TNFSF4P23510 183 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 LAP3P28838 519 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 DAP3P51398 398 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 ARHGDIAP52565 204 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 WDR4P57081 412 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 RPL18Q07020 188 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 HLXQ14774 488 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 TAF9Q16594 264 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 PAGE3Q5JUK9 113 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 SLC25A47Q6Q0C1 308 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 BRD3OSQ6XYD6 125 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 HDDC2Q7Z4H3 204 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 NANOGNBQ7Z5D8 188 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 KLBQ86Z14 1044 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 MUC20Q8N307 709 aaPredicted RBP8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 TMEM86BQ8N661 226 aa8.33□□□□□ -1.08
CALCOCO2-227ENST00000575560 C10orf82Q8WW14 230 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms