RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 DEFB109BQ30KR1 87 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 HSD17B12Q53GQ0 312 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 LRRC69Q6ZNQ3 347 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 FCRLAQ7L513 359 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 C20orf196Q8IYI0 205 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 ZNF676Q8N7Q3 588 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 ZIC4Q8N9L1 334 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 RNF133Q8WVZ7 376 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 MAP6Q96JE9 813 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 C4orf45Q96LM5 186 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 NIPAL2Q9H841 368 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 B3GAT2Q9NPZ5 323 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 POLR1DQ9Y2S0 133 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 FLVCR1Q9Y5Y0 555 aa17.25■□□□□ 0.35
RPAIN-210ENST00000571613 GVINP1Q7Z2Y8 2422 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 OR4C45A6NMZ5 311 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 ZNF716A6NP11 495 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 LOC110117498-PIK3R3F6TDL0 507 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 RAF1P04049 648 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 CLDN18P56856 261 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 Q499Y3 187 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 CCDC190Q86UF4 302 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 GPR148Q8TDV2 347 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 SLC39A7Q92504 469 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 SLC30A2Q9BRI3 323 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 FOXD3Q9UJU5 478 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-210ENST00000571613 ADAM30Q9UKF2 790 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 MCTS1Q9ULC4 181 aaKnown RBP17.24■□□□□ 0.35
RPAIN-210ENST00000571613 LRP12Q9Y561 859 aa17.24■□□□□ 0.35
RPAIN-210ENST00000571613 CTDSP2O14595 271 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 PDCD5O14737 125 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 GFRA3O60609 400 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 H2BFMP0C1H6 154 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 PPP3R1P63098 170 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 RSPO4Q2I0M5 234 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-210ENST00000571613 FOXL2NBQ6ZUU3 175 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 TMEM45BQ96B21 275 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 ULBP2Q9BZM5 246 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 SLITRK2Q9H156 845 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 SLC6A15Q9H2J7 730 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 POLE4Q9NR33 117 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 KCNMB2Q9Y691 235 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 R4GMQ9 66 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 FREM3P0C091 2139 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 IGKV3D-15A0A087WSY6 115 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 J3QRK9 145 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 DHHO43323 396 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 CELA3AP09093 270 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 RAB3BP20337 219 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 KLHL24Q6TFL4 600 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 CHMP1BQ7LBR1 199 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 AAED1Q7RTV5 226 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 ROBO4Q8WZ75 1007 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 HSD17B8Q92506 261 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 OR14A2Q96R54 314 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 NELFAQ9H3P2 528 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 LDAHQ9H6V9 325 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 ZDHHC11Q9H8X9 412 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 EMC3Q9P0I2 261 aa17.23■□□□□ 0.35
RPAIN-210ENST00000571613 MED12Q93074 2177 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 NCKAP5O14513 1909 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 TRBV5-5A0A0J9YX44 114 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 SHISA3A0PJX4 238 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 ANKRD61A6NGH8 418 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 MSR1P21757 451 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 TNFSF8P32971 234 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 SELENOPP49908 381 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 RIPPLY2Q5TAB7 128 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 OR7E24Q6IFN5 339 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 LINC00346Q8IVM7 164 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 OR13C5Q8NGS8 318 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 SLAMF6Q96DU3 332 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 SMAD5Q99717 465 aaKnown RBP17.22■□□□□ 0.35
RPAIN-210ENST00000571613 PPIL3Q9H2H8 161 aaKnown RBP17.22■□□□□ 0.35
RPAIN-210ENST00000571613 RNF122Q9H9V4 155 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 PARPBPQ9NWS1 579 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 GDF2Q9UK05 429 aaPredicted RBP17.22■□□□□ 0.35
RPAIN-210ENST00000571613 UGT2A1Q9Y4X1 527 aa17.22■□□□□ 0.35
RPAIN-210ENST00000571613 TRGV5A0A0B4J1U4 118 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 OR6C65A6NJZ3 312 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 ZNF878C9JN71 531 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 OCM2P0CE71 109 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 ZNF12P17014 697 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 SRMP19623 302 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 NPR2P20594 1047 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 MMP16P51512 607 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 WDR38Q5JTN6 314 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 ZNF704Q6ZNC4 412 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-210ENST00000571613 CATSPERDQ86XM0 798 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 PRSS35Q8N3Z0 413 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 PARP16Q8N5Y8 322 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 DERL3Q96Q80 235 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 ATF6BQ99941 703 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 EXO5Q9H790 373 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 CENPMQ9NSP4 180 aa17.21■□□□□ 0.35
RPAIN-210ENST00000571613 NOTOA8MTQ0 251 aa17.2■□□□□ 0.34
RPAIN-210ENST00000571613 KLK10O43240 276 aa17.2■□□□□ 0.34
RPAIN-210ENST00000571613 PSMD7P51665 324 aa17.2■□□□□ 0.34
RPAIN-210ENST00000571613 FAM27D1Q5T7N8 215 aa17.2■□□□□ 0.34
RPAIN-210ENST00000571613 OTPQ5XKR4 325 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms