RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 NAV3Q8IVL0 2385 aa17.39■□□□□ 0.37
CLK3-225ENST00000569063 ICMTO60725 284 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 NAT2P11245 290 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 CTLA4P16410 223 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 CALB2P22676 271 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 FPR3P25089 353 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 IFNGR2P38484 337 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 WNT5AP41221 380 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 GZMKP49863 264 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 RFX4Q33E94 735 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 MTX3Q5HYI7 312 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 UGT2A3Q6UWM9 527 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 UNQ6126/PRO20091Q6UXV3 157 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 HIPK1Q86Z02 1210 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 C1orf174Q8IYL3 243 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 OR1J1Q8NGS3 322 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 SYT4Q9H2B2 425 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 TAAR3PQ9P1P4 343 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 EIF3KQ9UBQ5 218 aaKnown RBP17.38■□□□□ 0.37
CLK3-225ENST00000569063 TMCC3Q9ULS5 477 aa17.38■□□□□ 0.37
CLK3-225ENST00000569063 SOCS2O14508 198 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 IMPA2O14732 288 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 OR10H3O60404 316 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 SLC16A7O60669 478 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 KHDRBS3O75525 346 aaKnown RBP17.37■□□□□ 0.37
CLK3-225ENST00000569063 KRT36O76013 467 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 IGHV3-13P01766 116 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 TACSTD2P09758 323 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 T-ENOLP0DO92 83 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 ZNF23P17027 643 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 HMGA2P52926 109 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 MOGQ16653 247 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 NKPD1Q17RQ9 610 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 ELFN2Q5R3F8 820 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 ZNF774Q6NX45 483 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 C1orf94Q6P1W5 598 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 CYP2R1Q6VVX0 501 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 PTCHD4Q6ZW05 846 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 GLB1L2Q8IW92 636 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 ZNF101Q8IZC7 436 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 MUC13Q9H3R2 512 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 EMC7Q9NPA0 242 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 TMEM160Q9NX00 188 aa17.37■□□□□ 0.37
CLK3-225ENST00000569063 CHD3Q12873 2000 aaKnown RBP17.37■□□□□ 0.37
CLK3-225ENST00000569063 LYNX1G3V0Z9 82 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 HPXP02790 462 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 LYNX1P0DP58 116 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 COX5BP10606 129 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 ATP6V1B2P21281 511 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 CDKN2AP42771 156 aaKnown RBP17.36■□□□□ 0.37
CLK3-225ENST00000569063 GSSP48637 474 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 MRPS11P82912 194 aaKnown RBP17.36■□□□□ 0.37
CLK3-225ENST00000569063 RINLQ6ZS11 566 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 ICA1LQ8NDH6 482 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 FANK1Q8TC84 345 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 MARS2Q96GW9 593 aaKnown RBP17.36■□□□□ 0.37
CLK3-225ENST00000569063 NUAK2Q9H093 628 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 OR52D1Q9H346 318 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 HINT3Q9NQE9 182 aaKnown RBP17.36■□□□□ 0.37
CLK3-225ENST00000569063 FAM53CQ9NYF3 392 aa17.36■□□□□ 0.37
CLK3-225ENST00000569063 NDRG4Q9ULP0 352 aaKnown RBP17.36■□□□□ 0.37
CLK3-225ENST00000569063 COA3Q9Y2R0 106 aaPredicted RBP17.36■□□□□ 0.37
CLK3-225ENST00000569063 TCRBV5S2A0A599 114 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 C17orf100A8MU93 164 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 ARPC3O15145 178 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 LILRA1O75019 489 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 SLC6A6P31641 620 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 MAGEA2P43356 314 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 LSM6P62312 80 aaKnown RBP17.35■□□□□ 0.37
CLK3-225ENST00000569063 SCRN3Q0VDG4 424 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 TRIM25Q14258 630 aaKnown RBP17.35■□□□□ 0.37
CLK3-225ENST00000569063 ALKBH6Q3KRA9 238 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 ZNF718Q3SXZ3 478 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 MBNL2Q5VZF2 373 aaKnown RBP17.35■□□□□ 0.37
CLK3-225ENST00000569063 LCN8Q6JVE9 175 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 GNPDA2Q8TDQ7 276 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 RDH5Q92781 318 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 ERMAPQ96PL5 475 aaPredicted RBP17.35■□□□□ 0.37
CLK3-225ENST00000569063 MAGIXQ9H6Y5 334 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 CHODLQ9H9P2 273 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 NKIRAS2Q9NYR9 191 aa17.35■□□□□ 0.37
CLK3-225ENST00000569063 PRPF19Q9UMS4 504 aaKnown RBP17.35■□□□□ 0.37
CLK3-225ENST00000569063 ANK3Q12955 4377 aaKnown RBP17.34■□□□□ 0.37
CLK3-225ENST00000569063 MPZL1O95297 269 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 PPP1R3DO95685 299 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 ZNF16P17020 682 aaPredicted RBP17.34■□□□□ 0.37
CLK3-225ENST00000569063 ACHEP22303 614 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 COL8A2P25067 703 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 CRABP1P29762 137 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 CHN2P52757 468 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 TSPAN31Q12999 210 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 AQP6Q13520 282 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 KCNMB1Q16558 191 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 PCGF3Q3KNV8 242 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 PGBD2Q6P3X8 592 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 TMEM154Q6P9G4 183 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 DHFR2Q86XF0 187 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 LINC00471Q8N535 108 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 SNX33Q8WV41 574 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 HPS1Q92902 700 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms