RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 H3BNH8 94 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 M0R3G1 203 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 CLDN11O75508 207 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 ACTL6AO96019 429 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 MOSP00540 346 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 UBCP0CG48 685 aaKnown RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 CALM1P0DP23 149 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 CALM2P0DP24 149 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 CALM3P0DP25 149 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 MGMTP16455 207 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 TUBG1P23258 451 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 AK4P27144 223 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 SLC26A3P40879 764 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 SH3BGRP55822 239 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 LYZP61626 148 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 STXBP1P61764 594 aaKnown RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 NUTF2P61970 127 aaKnown RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 RAB11AP62491 216 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 GNB2P62879 340 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 SLC25A11Q02978 314 aaKnown RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 RAB11BQ15907 218 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 SGCAQ16586 387 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 ZBED5Q49AG3 693 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 BEX5Q5H9J7 111 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 STUMQ69YW2 141 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 FRMPD2BQ6IN97 320 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 JAGN1Q8N5M9 183 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 DCAF4L2Q8NA75 395 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 SUMF2Q8NBJ7 301 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 DTX3LQ8TDB6 740 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 ZNF75CPQ92670 426 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 IMMP1LQ96LU5 166 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 SERPINB12Q96P63 405 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 P2RX4Q99571 388 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 ECSITQ9BQ95 431 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 ZYG11BQ9C0D3 744 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 C8orf33Q9H7E9 229 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 RETNQ9HD89 108 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 TUBG2Q9NRH3 451 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 ZMYM4Q5VZL5 1548 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 IFT172Q9UG01 1749 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 PPRC1Q5VV67 1664 aaKnown RBP3.52□□□□□ -1.85
CNOT1-209ENST00000566240 UHRF1BP1Q6BDS2 1440 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 TRAPPC8Q9Y2L5 1435 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 CLTCL1P53675 1640 aa3.52□□□□□ -1.85
CNOT1-209ENST00000566240 CEMIPQ8WUJ3 1361 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 DIP2CQ9Y2E4 1556 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 TRAV39A0A0B4J263 110 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 BOLA2-SMG1P6H3BVE0 249 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 DPM1O60762 260 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 AIFM1O95831 613 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 C6orf47O95873 294 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 CD160O95971 181 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 IGHV3-43DP0DP04 118 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 CTRLP40313 264 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 RAD51Q06609 339 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 DNAJC3Q13217 504 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 TRAM2Q15035 370 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 PGGHGQ32M88 737 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 RFX4Q33E94 735 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 RNF212Q495C1 297 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 SPESP1Q6UW49 350 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 ACP7Q6ZNF0 438 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 TMEM179Q6ZVK1 233 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 C8orf31Q8N9H6 132 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 CCDC54Q8NEL0 328 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 OR52E5Q8NH55 327 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 MCOLN3Q8TDD5 553 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 MYDGFQ969H8 173 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 ZNF707Q96C28 371 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-209ENST00000566240 AURKBQ96GD4 344 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-209ENST00000566240 GABARAPL3Q9BY60 117 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 UCK2Q9BZX2 261 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 RGCCQ9H4X1 137 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 CYP3A43Q9HB55 503 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 NTN4Q9HB63 628 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 BEX1Q9HBH7 125 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 KCNJ16Q9NPI9 418 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 MMP26Q9NRE1 261 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 RHBDD3Q9Y3P4 386 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 HEBP2Q9Y5Z4 205 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 MLH3Q9UHC1 1453 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 IQGAP1P46940 1657 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 PPLO60437 1756 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 VWDEQ8N2E2 1590 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 REREQ9P2R6 1566 aa3.51□□□□□ -1.85
CNOT1-209ENST00000566240 LMTK2Q8IWU2 1503 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 MROH7-TTC4A0A0A0MT08 1334 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 MROH2AA6NES4 1674 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 MYOM2P54296 1465 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 LYRM9A8MSI8 78 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 HIDE1A8MVS5 230 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 PEX7O00628 323 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 XKRYO14609 159 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 FCN3O75636 299 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 UTS2O95399 124 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 SERPINE2P07093 398 aa3.5□□□□□ -1.85
CNOT1-209ENST00000566240 PLEKP08567 350 aaPredicted RBP3.5□□□□□ -1.85
CNOT1-209ENST00000566240 MSR1P21757 451 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms