RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 A8MXK9 166 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 C3orf84H3BNL1 204 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 SPRY3O43610 288 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 SERPINA5P05154 406 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 SFTPBP07988 381 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 MELTFP08582 738 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 HOXB6P17509 224 aaKnown RBP7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 MAKP20794 623 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 GSK3BP49841 420 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 P2RY4P51582 365 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 COPZ1P61923 177 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 SELENOWP63302 87 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 BNIP2Q12982 314 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 C1DQ13901 141 aaKnown RBP7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 RAB39AQ14964 217 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 NRN1LQ496H8 165 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 MTX3Q5HYI7 312 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 MRPL2Q5T653 305 aaKnown RBP7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 GLYATQ6IB77 296 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 ZNF813Q6ZN06 617 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 GDPGP1Q6ZNW5 385 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 RAB40AQ8WXH6 277 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 TSPAN32Q96QS1 320 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 BCL2L14Q9BZR8 327 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 POLR2J2Q9GZM3 115 aaKnown RBP7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 POLR2J3Q9H1A7 115 aaKnown RBP7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 B3GAT2Q9NPZ5 323 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 RPS6KA6Q9UK32 745 aa7.59□□□□□ -1.19
VPS9D1-205ENST00000565452 CENPVL1A0A0U1RR11 272 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF816-ZNF321PA0A0X1KG74 233 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 KIR2DS1A0A191URI9 304 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 M0R3G1 203 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 CXCR6O00574 342 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 AKAP8O43823 692 aaKnown RBP7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 FMO6PO60774 539 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 UBL3O95164 117 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 PPP1R3DO95685 299 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 PTHP01270 115 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 IGHV3-13P01766 116 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 IGHV2-70P01814 119 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 OR8G3PP0DMU2 310 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 LIPAP38571 399 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 UCP2P55851 309 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 GABPB1Q06547 395 aaPredicted RBP7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 CD69Q07108 199 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 TRAP1Q12931 704 aaKnown RBP7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 TRIM25Q14258 630 aaKnown RBP7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 HERPUD1Q15011 391 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 DUSP7Q16829 419 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 WBP2NLQ6ICG8 309 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF836Q6ZNA1 936 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 Q6ZSV7 163 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 CCDC121Q6ZUS5 278 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 VRK2Q86Y07 508 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 KDM8Q8N371 416 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 LSMEM1Q8N8F7 131 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 OR4S1Q8NGB4 309 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 CNOT9Q92600 299 aaKnown RBP7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 SLC7A6OSQ96CW6 309 aaPredicted RBP7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 OXGR1Q96P68 337 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 LRMDAQ9H2I8 198 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 C12orf10Q9HB07 376 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 CDH20Q9HBT6 801 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 TMEM165Q9HC07 324 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 CYSLTR2Q9NS75 346 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 ACTR3BQ9P1U1 418 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 KIF17Q9P2E2 1029 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 MAGEL2Q9UJ55 1249 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 ZDHHC8Q9ULC8 765 aa7.58□□□□□ -1.2
VPS9D1-205ENST00000565452 H0YL77 283 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 AP3D1O14617 1153 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 TNFRSF13BO14836 293 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 GSC2O15499 205 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 ENTPD5O75356 428 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 BCAS1O75363 584 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 DNAJC8O75937 253 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 IGHV1-46P01743 117 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 IFNA8P32881 189 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 ACAA2P42765 397 aaKnown RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 SEC61A1P61619 476 aaKnown RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 EMX1Q04741 257 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 EPS8Q12929 822 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 KLHL22Q53GT1 634 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 RPS26P11Q5JNZ5 115 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 FOXB2Q5VYV0 432 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 PGM2L1Q6PCE3 622 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 C5orf46Q6UWT4 87 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 CBLL1Q75N03 491 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 ZNF627Q7L945 461 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 OLIG3Q7RTU3 272 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 RANBP3LQ86VV4 465 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 CLIP4Q8N3C7 705 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 SLC30A7Q8NEW0 376 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 OR1J2Q8NGS2 313 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 DNAJA4Q8WW22 397 aaPredicted RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 LRTOMTQ8WZ04 291 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 SLC25A36Q96CQ1 311 aa7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 MARS2Q96GW9 593 aaKnown RBP7.57□□□□□ -1.2
VPS9D1-205ENST00000565452 LRR1Q96L50 414 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms