RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RFC3P40938 356 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 SERPINB8P50452 374 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 ATP6V0D1P61421 351 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 MXD1Q05195 221 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 RAD51Q06609 339 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 SPAG1Q07617 926 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 SMARCB1Q12824 385 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 RCAN2Q14206 197 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 MLIPQ5VWP3 458 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF621Q6ZSS3 439 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 LINC00523Q86TU6 105 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 SNX31Q8N9S9 440 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 SUMF2Q8NBJ7 301 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 TMEM104Q8NE00 496 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 MNS1Q8NEH6 495 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 OR5T3Q8NGG3 340 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 OR2G3Q8NGZ4 309 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 OR51E1Q8TCB6 317 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 CD300LFQ8TDQ1 290 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 ITFG2Q969R8 447 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 ZIM3Q96PE6 472 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 TMEM38AQ9H6F2 299 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 TMEM165Q9HC07 324 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 ZC4H2Q9NQZ6 224 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 CTPS2Q9NRF8 586 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 ABCB10Q9NRK6 738 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 YARS2Q9Y2Z4 477 aaKnown RBP2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 NEUROG3Q9Y4Z2 214 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 KPTNQ9Y664 436 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 AK9Q5TCS8 1911 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 CAMTA1Q9Y6Y1 1673 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 PDS5BQ9NTI5 1447 aa2.24□□□□□ -2.05
SHCBP1-202ENST00000563219 TNIKQ9UKE5 1360 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 NFASCO94856 1347 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 KCNE1BA0A087WTH5 132 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 SMKR1H3BMG3 65 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 K7EMT4 169 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 GABRPO00591 440 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZBTB5O15062 677 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 SUPT3HO75486 399 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 SRP72O76094 671 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 FGFR1OPO95684 399 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 OTCP00480 354 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 GNAO1P09471 354 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 UBTFL6P0CB48 400 aaPredicted RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 CTRB1P17538 263 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 TCP1P17987 556 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 CEACAM3P40198 252 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 CTRLP40313 264 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 GPR1P46091 355 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 CD151P48509 253 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 XIAPP98170 497 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 MECOMQ03112 1051 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF33AQ06730 810 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 IFT88Q13099 833 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 DAZ2Q13117 558 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 PON3Q15166 354 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF726P1Q15940 193 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF829Q3KNS6 432 aaPredicted RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 FRMPD2BQ6IN97 320 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 CERS6Q6ZMG9 384 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 TMEM179Q6ZVK1 233 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 FAM122BQ7Z309 247 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 MRPL55Q7Z7F7 128 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 IQCF2Q8IXL9 164 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 MYOCDQ8IZQ8 938 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 MREGQ8N565 214 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ARRDC1Q8N5I2 433 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 INO80EQ8NBZ0 244 aaPredicted RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF596Q8TC21 504 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 APH1BQ8WW43 257 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ISOC2Q96AB3 205 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 CYYR1Q96J86 154 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF317Q96PQ6 595 aaPredicted RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 FOXC2Q99958 501 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 UQCC2Q9BRT2 126 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZYG11BQ9C0D3 744 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 PDFQ9HBH1 243 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 MYOZ2Q9NPC6 264 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 DAZ3Q9NR90 486 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF629Q9UEG4 869 aaPredicted RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 NEU3Q9UQ49 428 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 RCL1Q9Y2P8 373 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 KIF27Q86VH2 1401 aa2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNFX1Q9P2E3 1918 aaKnown RBP2.23□□□□□ -2.05
SHCBP1-202ENST00000563219 A0A0B4J2A0 478 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 A0A1W2PPV4 95 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 A6NDX4 124 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 LYRM9A8MSI8 78 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 FAM166BA8MTA8 275 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF99A8MXY4 864 aaPredicted RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 H7C1H1 209 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF701M0R085 212 aaPredicted RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 SCAMP2O15127 329 aaKnown RBP2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 CD5LO43866 347 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 SLC19A2O60779 497 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 HSBP1O75506 76 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 HLA-HP01893 362 aa2.22□□□□□ -2.05
SHCBP1-202ENST00000563219 HBE1P02100 147 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms