RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 EGR4Q05215 589 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 BSPH1Q075Z2 132 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 SCN1BQ07699 218 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 TSC22D1Q15714 1073 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ETFDHQ16134 617 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 SMN1Q16637 294 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 PGGHGQ32M88 737 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ZNF672Q499Z4 452 aaPredicted RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 RPS26P11Q5JNZ5 115 aaPredicted RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 ARMC4Q5T2S8 1044 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 HACD4Q5VWC8 232 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 C1orf94Q6P1W5 598 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 KLHL17Q6TDP4 642 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 PTCHD4Q6ZW05 846 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 HMGN2P46Q86SG4 172 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 COMTD1Q86VU5 262 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 VRK2Q86Y07 508 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 WFDC8Q8IUA0 241 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 PEX5LQ8IYB4 626 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 LSMEM1Q8N8F7 131 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ZIC4Q8N9L1 334 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 IL17RDQ8NFM7 739 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ZNF563Q8TA94 476 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 HSD17B8Q92506 261 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 RPL3LQ92901 407 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 RFKQ969G6 155 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 FBXW5Q969U6 566 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 C3orf49Q96BT1 292 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 DDIT4LQ96D03 193 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 PTDSS2Q9BVG9 487 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 SF3B5Q9BWJ5 86 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 TEX12Q9BXU0 123 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 GSX1Q9H4S2 264 aaPredicted RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 ESRP2Q9H6T0 727 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 NMNAT1Q9HAN9 279 aaPredicted RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 NGBQ9NPG2 151 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 DIABLOQ9NR28 239 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 ZNF275Q9NSD4 429 aaPredicted RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 TESQ9UGI8 421 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 ZNF229Q9UJW7 825 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.04□□□□□ -1.44
SPG11-224ENST00000561268 SLC9A8Q9Y2E8 581 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 EXOSC1Q9Y3B2 195 aaKnown RBP6.04□□□□□ -1.44
SPG11-224ENST00000561268 TMED7Q9Y3B3 224 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 RTTNQ86VV8 2226 aa6.04□□□□□ -1.44
SPG11-224ENST00000561268 DPRXA6NFQ7 191 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 FAM171A2A8MVW0 826 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 PRODHO43272 600 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 PRKYO43930 277 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 TPST2O60704 377 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 CYP7B1O75881 506 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 SOD3P08294 240 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 PRG2P13727 222 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 HLA-DMAP28067 261 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 PRKAR1BP31321 381 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 CRYBB2P43320 205 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 FOXG1P55316 489 aaPredicted RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 RAB25P57735 213 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 RPS4XP62701 263 aaKnown RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 SLC35A1P78382 337 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 CDK5Q00535 292 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 IL1RL1Q01638 556 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 IKZF1Q13422 519 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 PPA1Q15181 289 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 TRAM1Q15629 374 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 KCNJ8Q15842 424 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 GABRA6Q16445 453 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 HSD17B12Q53GQ0 312 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 WBP2NLQ6ICG8 309 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 CCBE1Q6UXH8 406 aaPredicted RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 TMPRSS11AQ6ZMR5 421 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 LSRQ86X29 649 aaPredicted RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 CIARTQ8N365 385 aaPredicted RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 CLIP4Q8N3C7 705 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 POC5Q8NA72 575 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 AQP11Q8NBQ7 271 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 ADPRHL1Q8NDY3 354 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 ATP6V1C2Q8NEY4 427 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 OR52P1PQ8NH57 321 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 NFKBIDQ8NI38 313 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 GRPEL2Q8TAA5 225 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 STK35Q8TDR2 534 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 TMEM171Q8WVE6 324 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 ACOT12Q8WYK0 555 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 AKAP1Q92667 903 aaKnown RBP eCLIP6.03□□□□□ -1.44
SPG11-224ENST00000561268 APH1AQ96BI3 265 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 CEP19Q96LK0 163 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 PRRC1Q96M27 445 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 Q96MF0 132 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 OPALINQ96PE5 141 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 NIPSNAP1Q9BPW8 284 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 C6orf62Q9GZU0 229 aaPredicted RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 SLC22A4Q9H015 551 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 NELFAQ9H3P2 528 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 KRCC1Q9NPI7 259 aaPredicted RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 SLC7A10Q9NS82 523 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 RLIMQ9NVW2 624 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 MRPL39Q9NYK5 338 aaKnown RBP6.03□□□□□ -1.44
SPG11-224ENST00000561268 B3GAT1Q9P2W7 334 aa6.03□□□□□ -1.44
SPG11-224ENST00000561268 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms