RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SYT4Q9H2B2 425 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 EGLN3Q9H6Z9 239 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 PLCXD1Q9NUJ7 323 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 IL20RAQ9UHF4 553 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 KLHL21Q9UJP4 597 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 TPRKBQ9Y3C4 175 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 UGT2A1Q9Y4X1 527 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 FKBP7Q9Y680 259 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 ABCA4P78363 2273 aa12.19□□□□□ -0.46
PKNOX1-209ENST00000560448 A0A1W2PR80 420 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 H3BN98 237 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 HS3ST1O14792 307 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 MRPS14O60783 128 aaKnown RBP12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 RAF1P04049 648 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 IGFBP1P08833 259 aaPredicted RBP12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 CD79AP11912 226 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 HIST1H1CP16403 213 aaKnown RBP12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 MSR1P21757 451 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 LSM6P62312 80 aaKnown RBP12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 RAB1AP62820 205 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 GLO1Q04760 184 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 PLP2Q04941 152 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 FMODQ06828 376 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 PIGFQ07326 219 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF672Q499Z4 452 aaPredicted RBP12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 TMEM236Q5W0B7 351 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 C12orf73Q69YU5 71 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC27A4Q6P1M0 643 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 OR4F15Q8NGB8 312 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 FAM81AQ8TBF8 368 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 PIGTQ969N2 578 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 SIGLEC11Q96RL6 698 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 TSSK6Q9BXA6 273 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 PCDHGB1Q9Y5G3 927 aa12.18□□□□□ -0.46
PKNOX1-209ENST00000560448 IGHV1-18A0A0C4DH31 117 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 C12orf71A8MTZ7 269 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 HMGN1P05114 100 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 SERPINA5P05154 406 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 CST2P09228 141 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 PCMT1P22061 227 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 LAP3P28838 519 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 CDKN2AP42771 156 aaKnown RBP12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 BLVRAP53004 296 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 RAB39AQ14964 217 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 CLEC12AQ5QGZ9 265 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF544Q6NX49 715 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 LEG1Q6P5S2 330 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC22A25Q6T423 547 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 UNQ6126/PRO20091Q6UXV3 157 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 PTCHD4Q6ZW05 846 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 GPR141Q7Z602 305 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 ZBTB46Q86UZ6 589 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 MDP1Q86V88 176 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 GLB1L2Q8IW92 636 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 SKA3Q8IX90 412 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 ALDH16A1Q8IZ83 802 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 OR2T4Q8NH00 348 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 NSMAFQ92636 917 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 NABP1Q96AH0 204 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 MBD6Q96DN6 1003 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 CMC2Q9NRP2 79 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 FKBP14Q9NWM8 211 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 SCN3BQ9NY72 215 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF224Q9NZL3 707 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 ERVK-18Q9QC07 812 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 ST6GALNAC2Q9UJ37 374 aa12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 FBXO9Q9UK97 447 aaPredicted RBP12.17□□□□□ -0.46
PKNOX1-209ENST00000560448 IGKV1D-43A0A0B4J1Z2 117 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 RIIAD1A6NNX1 92 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 VSTM5A8MXK1 200 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 PTGES3LE9PB15 166 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 SLC16A7O60669 478 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 FAM20BO75063 409 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 SEC14L2O76054 403 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 HLA-HP01893 362 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 CECR9P0C854 216 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 CTLA4P16410 223 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF14P17017 642 aaPredicted RBP12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 ZNF3P17036 446 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 DNASE1P24855 282 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 TTKP33981 857 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 GRK5P34947 590 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 GIPRP48546 466 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 KRTAP10-9P60411 292 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 CDC42P60953 191 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 NAAAQ02083 359 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 NEDD8Q15843 81 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 KCNMB1Q16558 191 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 PGGHGQ32M88 737 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 CDH24Q86UP0 819 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
PKNOX1-209ENST00000560448 NUP37Q8NFH4 326 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms