RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 MGAT4AQ9UM21 535 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 HHLA2Q9UM44 414 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 R4GMQ9 66 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 ADAMTS9Q9P2N4 1935 aa6.53□□□□□ -1.36
VPS13C-206ENST00000558338 SPTBP11277 2137 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 PCDH15Q96QU1 1955 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 IGLV3-32A0A0A0MS00 114 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 A0A1W2PNV4 684 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 SOX1O00570 391 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 YKT6O15498 198 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 CREBL2O60519 120 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 CTAG2O75638 210 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 ISG15P05161 165 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 TPOP07202 933 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 GIMD1P0DJR0 217 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 IFNGR1P15260 489 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 CTLA4P16410 223 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 DNASE1P24855 282 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 EPHA8P29322 1005 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 PTGS2P35354 604 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 HTR2BP41595 481 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF41P51814 821 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 DCDP81605 110 aaKnown RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 CLPPQ16740 277 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 PCK2Q16822 640 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 SLC25A53Q5H9E4 307 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 C6orf183Q5T699 404 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 TMEM244Q5VVB8 128 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 C1QL3Q5VWW1 255 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 THOC7Q6I9Y2 204 aaKnown RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 PAPD4Q6PIY7 484 aaKnown RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 GLDNQ6ZMI3 551 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 NDUFAF7Q7L592 441 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 BPHLQ86WA6 291 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 SERPINA12Q8IW75 414 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 APCDD1LQ8NCL9 501 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 OR11G2Q8NGC1 345 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 OR6M1Q8NGM8 313 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 SLC22A8Q8TCC7 542 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 ASB13Q8WXK3 278 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 FOXRED1Q96CU9 486 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 MRGPRX4Q96LA9 322 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 CDC6Q99741 560 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 CMKLR1Q99788 373 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 ABHD6Q9BV23 337 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 CLEC4MQ9H2X3 399 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 DLL4Q9NR61 685 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 SERINC1Q9NRX5 453 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 B3GNT2Q9NY97 397 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 PPP4R1LQ9P1A2 415 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 SUSD2Q9UGT4 822 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 ZNF107Q9UII5 783 aaPredicted RBP6.52□□□□□ -1.37
VPS13C-206ENST00000558338 B3GALT5Q9Y2C3 310 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 LRP12Q9Y561 859 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 SPAG17Q6Q759 2223 aa6.52□□□□□ -1.37
VPS13C-206ENST00000558338 BRWD1Q9NSI6 2320 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 TRBV11-1A0A0K0K1C0 115 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 UBE2QL1A1L167 161 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SMLR1H3BR10 107 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ARPC1BO15143 372 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 GMDSO60547 372 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SCRG1O75711 98 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 ZFAND5O76080 213 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 GIPP09681 153 aaPredicted RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 CSRP1P21291 193 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 FKBP2P26885 142 aaKnown RBP6.51□□□□□ -1.37
VPS13C-206ENST00000558338 DCTDP32321 178 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 MAGEB1P43366 347 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 DNASE1L1P49184 302 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 POU3F4P49335 361 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 VEGFCP49767 419 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 EMP2P54851 167 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 FBXW4P57775 412 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 RAP2BP61225 183 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 GALK2Q01415 458 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 TLE3Q04726 772 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 IKZF1Q13422 519 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 MELKQ14680 651 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR7A5Q15622 319 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 PCGF3Q3KNV8 242 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 LYSMD4Q5XG99 296 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 TMEM225Q6GV28 225 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR7E24Q6IFN5 339 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 VHLLQ6RSH7 139 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 FAM198BQ6UWH4 519 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SLC35D2Q76EJ3 337 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 CDH26Q8IXH8 852 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 MEIOBQ8N635 442 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 DNAAF1Q8NEP3 725 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SLC26A10Q8NG04 563 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR10H5Q8NGA6 315 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR13C3Q8NGS6 347 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 OR10AC1Q8NH08 325 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 CEP76Q8TAP6 659 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 SNAPC3Q92966 411 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 NAT6Q93015 286 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 PTX4Q96A99 478 aa6.51□□□□□ -1.37
VPS13C-206ENST00000558338 FAM3DQ96BQ1 224 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms