RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SASH3O75995 380 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 NGFP01138 241 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 AVPP01185 164 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 IGHV2-5P01817 119 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 IFNW1P05000 195 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 ADH4P08319 380 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 FUT4P22083 530 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 SLC3A1Q07837 685 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 FHL1Q13642 323 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 TRAM2Q15035 370 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 TMEM255AQ5JRV8 349 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 CGB2Q6NT52 195 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 ARL9Q6T311 187 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 IGFN1Q86VF2 1251 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 SEMA6DQ8NFY4 1073 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 ABHD4Q8TB40 342 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 DIRC2Q96SL1 478 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 WACQ9BTA9 647 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 CMTM6Q9NX76 183 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 RHCGQ9UBD6 479 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 CGGBP1Q9UFW8 167 aaPredicted RBP13.49□□□□□ -0.25
TUBB3-213ENST00000557262 ZDHHC8Q9ULC8 765 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 PCDHB10Q9UN67 800 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 SNX13Q9Y5W8 968 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 CAPN7Q9Y6W3 813 aa13.49□□□□□ -0.25
TUBB3-213ENST00000557262 A0A0G2JMP0 313 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 A0A0X1KG70 313 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 C12orf71A8MTZ7 269 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 H3BSA7 217 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 J3KTA2 159 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 J3QLI3 93 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 FFAR1O14842 300 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 SLC22A2O15244 555 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 UBOX5O94941 541 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 MSR1P21757 451 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 SLC9A3P48764 834 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 ARHGDIAP52565 204 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
TUBB3-213ENST00000557262 ZNF774Q6NX45 483 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 USP43Q70EL4 1123 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 VTCN1Q7Z7D3 282 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 SLC15A3Q8IY34 581 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 OFCC1Q8IZS5 231 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 OR4M2Q8NGB6 313 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 RP9Q8TA86 221 aaKnown RBP13.48□□□□□ -0.25
TUBB3-213ENST00000557262 TMPRSS13Q9BYE2 586 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 MAN2C1Q9NTJ4 1040 aa13.48□□□□□ -0.25
TUBB3-213ENST00000557262 LOC105371242A0A075B767 164 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 A0A087WUU8 490 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 ZSCAN5BA6NJL1 495 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 SCG5P05408 212 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 EPHA1P21709 976 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 TUBG1P23258 451 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 ZMAT1Q5H9K5 638 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 DCAF12L2Q5VW00 463 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 RFPL4BQ6ZWI9 263 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 ARPINQ7Z6K5 226 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 ZER1Q7Z7L7 766 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 PEG10Q86TG7 708 aaKnown RBP13.47□□□□□ -0.25
TUBB3-213ENST00000557262 ACOT11Q8WXI4 607 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-213ENST00000557262 RCN3Q96D15 328 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 GAL3ST1Q99999 423 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 POLE4Q9NR33 117 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 GRHPRQ9UBQ7 328 aa13.47□□□□□ -0.25
TUBB3-213ENST00000557262 NDRG4Q9ULP0 352 aaKnown RBP13.47□□□□□ -0.25
TUBB3-213ENST00000557262 CXCR6O00574 342 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 GSTA4O15217 222 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 AHCYL1O43865 530 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 RGS9O75916 674 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-213ENST00000557262 ZNF682O95780 498 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 CD55P08174 381 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 COX5BP10606 129 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 GATA3P23771 443 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 RPL4P36578 427 aaKnown RBP13.46□□□□□ -0.25
TUBB3-213ENST00000557262 HILS1P60008 231 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 LIPEQ05469 1076 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 PSG7Q13046 419 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 ZBED5Q49AG3 693 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 IFI44LQ53G44 452 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 MTX3Q5HYI7 312 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 TBPL2Q6SJ96 375 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 ZNF730Q6ZMV8 503 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 MBOAT2Q6ZWT7 520 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 FKBP9P1Q75LS8 142 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 CBLL1Q75N03 491 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 RRM2BQ7LG56 351 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 C1QL2Q7Z5L3 287 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 TREML1Q86YW5 311 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 POU5F2Q8N7G0 328 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 OR13C2Q8NGS9 318 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 NANPQ8TBE9 248 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 GEMIN6Q8WXD5 167 aaKnown RBP13.46□□□□□ -0.25
TUBB3-213ENST00000557262 JMJD8Q96S16 334 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 MSL2Q9HCI7 577 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 TBCCD1Q9NVR7 557 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 ARMCX1Q9P291 453 aa13.46□□□□□ -0.25
TUBB3-213ENST00000557262 GMPR2Q9P2T1 348 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms