RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 WBP4O75554 376 aaKnown RBP1.67□□□□□ -2.14
SCFD1-218ENST00000556256 AQP8O94778 261 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 AGTP01019 485 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SERPINE2P07093 398 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CALM1P0DP23 149 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CALM2P0DP24 149 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CALM3P0DP25 149 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 PRPS2P11908 318 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CCNB1P14635 433 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF24P17028 368 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SLC1A1P43005 524 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CCNA1P78396 465 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 TWF1Q12792 350 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SELENBP1Q13228 472 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SLAQ13239 276 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 MAB21L1Q13394 359 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 EIF4EBP1Q13541 118 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-218ENST00000556256 PRPSAP1Q14558 356 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 PTGES3Q15185 160 aaKnown RBP1.67□□□□□ -2.14
SCFD1-218ENST00000556256 OR7A5Q15622 319 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 UBE2SQ16763 222 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 PGGHGQ32M88 737 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 ALKBH6Q3KRA9 238 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 HSDL1Q3SXM5 330 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 C22orf42Q6IC83 251 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 REEP3Q6NUK4 255 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 NTM-AS1Q6ZSK4 140 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 NCCRP1Q6ZVX7 275 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SLC16A14Q7RTX9 510 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 BIVMQ86UB2 503 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 OAFQ86UD1 273 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 CTAGE6Q86UF2 777 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 TTC5Q8N0Z6 440 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 LYPD1Q8N2G4 141 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 BBS5Q8N3I7 341 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 OR2A1Q8NGT9 310 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 UBALD1Q8TB05 177 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 NRGNQ92686 78 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 MRGPRFQ96AM1 343 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 GALNT14Q96FL9 552 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 FOPNLQ96NB1 174 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 SAV1Q9H4B6 383 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-218ENST00000556256 NEK6Q9HC98 313 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF160Q9HCG1 818 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 MTCH1Q9NZJ7 389 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 ZNF282Q9UDV7 671 aaPredicted RBP1.67□□□□□ -2.14
SCFD1-218ENST00000556256 OPN4Q9UHM6 478 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 PITPNC1Q9UKF7 332 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
SCFD1-218ENST00000556256 IGSF9BQ9UPX0 1349 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 COL22A1Q8NFW1 1626 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 SMCO3A2RU48 225 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 SCAMP2O15127 329 aaKnown RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 EIF3HO15372 352 aaKnown RBP eCLIP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 NUPL2O15504 423 aaKnown RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 EIF4E2O60573 245 aaKnown RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ENTPD5O75356 428 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 H6PDO95479 791 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 HLA-DPB1P04440 258 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 FABP3P05413 133 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CD5P06127 495 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 BCHEP06276 602 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CISD3P0C7P0 127 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CT45A6P0DMU7 189 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CT45A5P0DMU8 189 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CT45A7P0DMV0 189 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 OR5H8P0DN80 308 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 PGAM1P18669 254 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 RAB3BP20337 219 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 DCKP27707 260 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 RRM2P31350 389 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 NAMPTP43490 491 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CSNK1A1P48729 337 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CSNK1EP49674 416 aaKnown RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 RND2P52198 227 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CRISP1P54107 249 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ESRRGP62508 458 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 PRR3P79522 188 aaKnown RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ERCC8Q13216 396 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CUL2Q13617 745 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 GINS1Q14691 196 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ZSCAN26Q16670 478 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CT45A1Q5HYN5 189 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 SOHLH1Q5JUK2 328 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 PPM1LQ5SGD2 360 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CCNJQ5T5M9 372 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 DNAJC24Q6P3W2 148 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CEMP1Q6PRD7 247 aaPredicted RBP1.66□□□□□ -2.14
SCFD1-218ENST00000556256 TMEM220Q6QAJ8 160 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ARL9Q6T311 187 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 PGAM4Q8N0Y7 254 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 OR4A4PQ8NGN8 299 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 OR5B3Q8NH48 314 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 OR5W2Q8NH69 310 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CT45A3Q8NHU0 189 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 ABHD3Q8WU67 409 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 PANX1Q96RD7 426 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 CHP1Q99653 195 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 SLC25A2Q9BXI2 301 aa1.66□□□□□ -2.14
SCFD1-218ENST00000556256 TMEM185BQ9H7F4 350 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms