RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ADH4P08319 380 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 WNT2P09544 360 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 ALDOCP09972 364 aaKnown RBP5.7□□□□□ -1.5
ATXN3-236ENST00000556220 LINC00032P0C843 101 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 NEFHP12036 1026 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 CCL2P13500 99 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 CPT2P23786 658 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 SOAT1P35610 550 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 SLC1A6P48664 564 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 MMP15P51511 669 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 DNAJB13P59910 316 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 RPL38P63173 70 aaKnown RBP5.7□□□□□ -1.5
ATXN3-236ENST00000556220 GLO1Q04760 184 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 RBBP4Q09028 425 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 FUT5Q11128 374 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 MFSD13AQ14CX5 517 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 GPR157Q5UAW9 335 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 HHATQ5VTY9 493 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 CARD17Q5XLA6 110 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 CLEC6AQ6EIG7 209 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 RNF165Q6ZSG1 346 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 FRMD7Q6ZUT3 714 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 LCA5Q86VQ0 697 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 SNX32Q86XE0 403 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 C1orf174Q8IYL3 243 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 FGFBP3Q8TAT2 258 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 RAB40AQ8WXH6 277 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 CFHR4Q92496 578 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 SLC25A36Q96CQ1 311 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 SLC7A6OSQ96CW6 309 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-236ENST00000556220 SLC35G5Q96KT7 338 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 C7orf26Q96N11 449 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 FOXB1Q99853 325 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 PTDSS2Q9BVG9 487 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 OR10A2Q9H208 303 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 OR51B6Q9H340 312 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 CDH20Q9HBT6 801 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 B3GAT2Q9NPZ5 323 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 TMEM106BQ9NUM4 274 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 ARL8BQ9NVJ2 186 aa5.7□□□□□ -1.5
ATXN3-236ENST00000556220 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-236ENST00000556220 A0A096LPI6 279 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 RNF103-CHMP3A0A140T963 221 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 AZIN1O14977 448 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 XPNPEP2O43895 674 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 TSPAN9O75954 239 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 MFN2O95140 757 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 AHSA1O95433 338 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 SNAP29O95721 258 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 MPIG6BO95866 241 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 CD55P08174 381 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 GKN3PP0CG01 181 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 MYL2P10916 166 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 GTF2E2P29084 291 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 LIPAP38571 399 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 ACAA2P42765 397 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 ABCE1P61221 599 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 NCALDP61601 193 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 COPZ1P61923 177 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 BTG1P62324 171 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 HNRNPA0Q13151 305 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 PMS2P3Q13401 168 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 GNA13Q14344 377 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 HERPUD1Q15011 391 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 LARS2Q15031 903 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 ZNF718Q3SXZ3 478 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 GPAT3Q53EU6 434 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 SPRNQ5BIV9 151 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 CFAP157Q5JU67 520 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 MRPL2Q5T653 305 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 FOXB2Q5VYV0 432 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 KANK2Q63ZY3 851 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 WBP2NLQ6ICG8 309 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 ZNF774Q6NX45 483 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 TNFAIP8L2Q6P589 184 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 GDPGP1Q6ZNW5 385 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 Q6ZTK2 550 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 PIWIL3Q7Z3Z3 882 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 NUDCD3Q8IVD9 361 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 SKA3Q8IX90 412 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 ZNF440Q8IYI8 595 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 KRTCAP2Q8N6L1 136 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 ZNF283Q8N7M2 679 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 CCDC63Q8NA47 563 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 ICA1LQ8NDH6 482 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 OR1J2Q8NGS2 313 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 IL17DQ8TAD2 202 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 AGR3Q8TD06 166 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 GEMIN6Q8WXD5 167 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 CCDC126Q96EE4 140 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 MAELQ96JY0 434 aaKnown RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 DUSP26Q9BV47 211 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 EMC6Q9BV81 110 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 TMEM120AQ9BXJ8 343 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 DPY30Q9C005 99 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 LRMDAQ9H2I8 198 aa5.69□□□□□ -1.5
ATXN3-236ENST00000556220 WDR55Q9H6Y2 383 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 MTHFD2LQ9H903 347 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-236ENST00000556220 NANOGQ9H9S0 305 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms