RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 DNAJC27Q9NZQ0 273 aa8.42□□□□□ -1.06
ACTN1-215ENST00000555616 VSX1Q9NZR4 365 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-215ENST00000555616 UPB1Q9UBR1 384 aa8.42□□□□□ -1.06
ACTN1-215ENST00000555616 PCDHGB5Q9Y5G0 923 aa8.42□□□□□ -1.06
ACTN1-215ENST00000555616 FREM1Q5H8C1 2179 aa8.42□□□□□ -1.06
ACTN1-215ENST00000555616 ROS1P08922 2347 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 IRGMA1A4Y4 181 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 SLC22A23A1A5C7 686 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 OR6C68A6NDL8 312 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 TRIM64A6NGJ6 449 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 SLC22A31A6NKX4 558 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 SHISA9B4DS77 424 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 H7C1C5 153 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 FAM20BO75063 409 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 ENTPD6O75354 484 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 WBP4O75554 376 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 TRMUO75648 421 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF432O94892 652 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 CCDC159P0C7I6 412 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 DANCRP0C864 163 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 PGA4P0DJD7 388 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 PGA3P0DJD8 388 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 SMIM18P0DKX4 95 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 CRABP1P29762 137 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 FMO3P31513 532 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 PTH2RP49190 550 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 CENPAP49450 140 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 SELENOPP49908 381 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 BLVRAP53004 296 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 CDH11P55287 796 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 RPS7P62081 194 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 LCN6P62502 163 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 CAMK2DQ13557 499 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 KLHL12Q53G59 568 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 SLC35D3Q5M8T2 416 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 RBM48Q5RL73 367 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 C6orf141Q5SZD1 244 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 THEM4Q5T1C6 240 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 AADACL4Q5VUY2 407 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 CARD17Q5XLA6 110 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 PRSS57Q6UWY2 283 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 TMEM108Q6UXF1 575 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 ABHD12BQ7Z5M8 362 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 TMEM123Q8N131 208 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 PROKR2Q8NFJ6 384 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 BPIFB6Q8NFQ5 453 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 TSPAN14Q8NG11 270 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 OR9Q1Q8NGQ5 310 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 OR6N1Q8NGY5 312 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 OR52N5Q8NH56 324 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 TMEM171Q8WVE6 324 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 APH1BQ8WW43 257 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 FBXW5Q969U6 566 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 ALKBH3Q96Q83 286 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 MRPL13Q9BYD1 178 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 LINC00470Q9BZP3 86 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 OR51V1Q9H2C8 321 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 CXorf56Q9H5V9 222 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 OBP2BQ9NPH6 170 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 RPRD1BQ9NQG5 326 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 SLC17A5Q9NRA2 495 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 WARS2Q9UGM6 360 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 MOKQ9UQ07 419 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 AMDHD2Q9Y303 409 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 TPRKBQ9Y3C4 175 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 RPL36Q9Y3U8 105 aaKnown RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 FKBP7Q9Y680 259 aa8.41□□□□□ -1.06
ACTN1-215ENST00000555616 NSD1Q96L73 2696 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-215ENST00000555616 EFCAB10A6NFE3 127 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF587BE7ETH6 402 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 OVOL3O00110 214 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 SLC1A7O00341 560 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 ABCD4O14678 606 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 KRT33AO76009 404 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 SOD3P08294 240 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 SPI1P17947 270 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 PTAFRP25105 342 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 HTR1FP30939 366 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 ATP6V1E1P36543 226 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 MTNR1AP48039 350 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF83P51522 516 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 NUDT6P53370 316 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 SH3BGRP55822 239 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-215ENST00000555616 GABARAPL2P60520 117 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 TUBA4AP68366 448 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 GLO1Q04760 184 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 RUNX1T1Q06455 604 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 POU4F2Q12837 409 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 APOFQ13790 326 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 C9orf135Q5VTT2 229 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 MEPCEQ7L2J0 689 aaKnown RBP8.4□□□□□ -1.06
ACTN1-215ENST00000555616 LINGO2Q7L985 606 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 ZBTB46Q86UZ6 589 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 C20orf196Q8IYI0 205 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 GPR137CQ8N3F9 429 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 WDR31Q8NA23 367 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 OR6K6Q8NGW6 343 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 NEUROG1Q92886 237 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 PTP4A1Q93096 173 aa8.4□□□□□ -1.06
ACTN1-215ENST00000555616 TMEM54Q969K7 222 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms