RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PGM2L1Q6PCE3 622 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 C16orf89Q6UX73 402 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 DPY19L2P2Q6ZN68 376 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 ARHGAP24Q8N264 748 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 OR1J1Q8NGS3 322 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 MCUR1Q96AQ8 359 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 FAM46AQ96IP4 442 aaKnown RBP10.13□□□□□ -0.79
VRK1-204ENST00000555351 RSRC1Q96IZ7 334 aaKnown RBP10.13□□□□□ -0.79
VRK1-204ENST00000555351 Q96M85 177 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 NSMCE2Q96MF7 247 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 SNX18Q96RF0 628 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 SHARPINQ9H0F6 387 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 RACGAP1Q9H0H5 632 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 WNT5BQ9H1J7 359 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 TPK1Q9H3S4 243 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 ELOVL3Q9HB03 270 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 IL1RAPQ9NPH3 570 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 CYSLTR2Q9NS75 346 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 VSX1Q9NZR4 365 aaPredicted RBP10.13□□□□□ -0.79
VRK1-204ENST00000555351 TAAR3PQ9P1P4 343 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 ATPIF1Q9UII2 106 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 AURKCQ9UQB9 309 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 ADAM18Q9Y3Q7 739 aa10.13□□□□□ -0.79
VRK1-204ENST00000555351 SONP18583 2426 aaKnown RBP10.13□□□□□ -0.79
VRK1-204ENST00000555351 TRBV4-1A0A0J9YWV2 114 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 A0A1W2PPL8 197 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 C5orf49A4QMS7 147 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 J3QW42 95 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 HAX1O00165 279 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 ARPC3O15145 178 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 RP2O75695 350 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 GADD45GO95257 159 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 TFP02787 698 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 HPXP02790 462 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 PCMT1P22061 227 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 GCH1P30793 250 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 IFNGR2P38484 337 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 WNT5AP41221 380 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 RPS6KA3P51812 740 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 ARHGDIAP52565 204 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 AQP6Q13520 282 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 KRR1Q13601 381 aaKnown RBP10.12□□□□□ -0.79
VRK1-204ENST00000555351 MAD2L1BPQ15013 274 aaPredicted RBP10.12□□□□□ -0.79
VRK1-204ENST00000555351 KCNMB1Q16558 191 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 ZMAT1Q5H9K5 638 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 MTX3Q5HYI7 312 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 SMARCD3Q6STE5 483 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 ZER1Q7Z7L7 766 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 GLB1L2Q8IW92 636 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 FAM86B1Q8N7N1 296 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 CLDN22Q8N7P3 220 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 NPEPL1Q8NDH3 523 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 IPCEF1Q8WWN9 437 aaPredicted RBP10.12□□□□□ -0.79
VRK1-204ENST00000555351 MARS2Q96GW9 593 aaKnown RBP10.12□□□□□ -0.79
VRK1-204ENST00000555351 COG8Q96MW5 612 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 DIRC2Q96SL1 478 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 CDRT15Q96T59 188 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 TBCCD1Q9NVR7 557 aa10.12□□□□□ -0.79
VRK1-204ENST00000555351 UNC119BA6NIH7 251 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 ARPC2O15144 300 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 IDH3BO43837 385 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 KHDRBS3O75525 346 aaKnown RBP10.11□□□□□ -0.79
VRK1-204ENST00000555351 KRT36O76013 467 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 CLPTM1O96005 669 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 TGFAP01135 160 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 NAT2P11245 290 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 IGFBP5P24593 272 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 FPR3P25089 353 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 CRABP1P29762 137 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 CRYBB2P43320 205 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 GPR6P46095 362 aaPredicted RBP10.11□□□□□ -0.79
VRK1-204ENST00000555351 HMGA2P52926 109 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 CDH15P55291 814 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 FXYD6P3P58550 94 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 SEC23BQ15437 767 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 DNM1P34Q6PK57 102 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 CXXC5Q7LFL8 322 aaKnown RBP10.11□□□□□ -0.79
VRK1-204ENST00000555351 MEX3DQ86XN8 651 aaKnown RBP10.11□□□□□ -0.79
VRK1-204ENST00000555351 ZNF101Q8IZC7 436 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 LINC00471Q8N535 108 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 RNF148Q8N7C7 305 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 AKR7LQ8NHP1 331 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 KLF14Q8TD94 323 aaPredicted RBP10.11□□□□□ -0.79
VRK1-204ENST00000555351 MUC13Q9H3R2 512 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 ARL8BQ9NVJ2 186 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 ACTR3BQ9P1U1 418 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 KLHL21Q9UJP4 597 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 FZR1Q9UM11 496 aa10.11□□□□□ -0.79
VRK1-204ENST00000555351 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.791e-7■■■■■ 26.9
VRK1-204ENST00000555351 PLSCR5A0PG75 271 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 LRP5LA4QPB2 252 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 B4DSR2 109 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 SGCEO43556 437 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 NCR1O76036 304 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 FABP3P05413 133 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 CTLA4P16410 223 aa10.1□□□□□ -0.79
VRK1-204ENST00000555351 TCN1P20061 433 aaPredicted RBP10.1□□□□□ -0.79
VRK1-204ENST00000555351 CCNOP22674 350 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms