RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 IFNA8P32881 189 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 IL13RA1P78552 427 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 ZNF154Q13106 437 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 BAMBIQ13145 260 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 SELPLGQ14242 412 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 TMEM155Q4W5P6 130 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 FAM205BPQ63HN1 556 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 TSPYL5Q86VY4 417 aaPredicted RBP13.09□□□□□ -0.31
NEDD1-207ENST00000555114 NPEPL1Q8NDH3 523 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 DEFB108BQ8NET1 73 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 OR10A6Q8NH74 314 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 TSPEARQ8WU66 669 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 TMEM255BQ8WV15 326 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 DYDC1Q8WWB3 177 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 LIPHQ8WWY8 451 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
NEDD1-207ENST00000555114 SLC25A28Q96A46 364 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 C4orf45Q96LM5 186 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 MSL2Q9HCI7 577 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 TUBG2Q9NRH3 451 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 TMEM106BQ9NUM4 274 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 POLR3KQ9Y2Y1 108 aaPredicted RBP13.09□□□□□ -0.31
NEDD1-207ENST00000555114 UGT2A1Q9Y4X1 527 aa13.09□□□□□ -0.31
NEDD1-207ENST00000555114 HTR3EA5X5Y0 456 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 DNAJC9-AS1A6NH13 148 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 SURF4O15260 269 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 IFNA14P01570 189 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 THRBP10828 461 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 ZFP36P26651 326 aaKnown RBP13.08□□□□□ -0.32
NEDD1-207ENST00000555114 LAP3P28838 519 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 FMODQ06828 376 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 TOP3AQ13472 1001 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-207ENST00000555114 VMACQ2NL98 169 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 ESCO2Q56NI9 601 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 SLC25A47Q6Q0C1 308 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 CCDC80Q76M96 950 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 NKAIN4Q8IVV8 208 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 MOSPD2Q8NHP6 518 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 LRRC58Q96CX6 371 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.32
NEDD1-207ENST00000555114 SAMD8Q96LT4 415 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 SH3GL1Q99961 368 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 WACQ9BTA9 647 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 MS4A7Q9GZW8 240 aaPredicted RBP13.08□□□□□ -0.32
NEDD1-207ENST00000555114 WNT5BQ9H1J7 359 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 PATZ1Q9HBE1 687 aaKnown RBP13.08□□□□□ -0.32
NEDD1-207ENST00000555114 MAN2C1Q9NTJ4 1040 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 OR5V1Q9UGF6 321 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 RIMS3Q9UJD0 308 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 KLHL21Q9UJP4 597 aa13.08□□□□□ -0.32
NEDD1-207ENST00000555114 POM121CA8CG34 1229 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 ABHD16AO95870 558 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 TSPAN19P0C672 248 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 ZNF12P17014 697 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 MTNR1AP48039 350 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 BTG1P62324 171 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 CDK5R2Q13319 367 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
NEDD1-207ENST00000555114 AGBL2Q5U5Z8 902 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 SYT9Q86SS6 491 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
NEDD1-207ENST00000555114 STON2Q8WXE9 905 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 COG8Q96MW5 612 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 UNKLQ9H9P5 680 aaKnown RBP13.07□□□□□ -0.32
NEDD1-207ENST00000555114 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 MMP26Q9NRE1 261 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 C20orf141Q9NUB4 165 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 ZNF69Q9UC07 566 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 EGFL7Q9UHF1 273 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 HIF3AQ9Y2N7 669 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 INSIG2Q9Y5U4 225 aa13.07□□□□□ -0.32
NEDD1-207ENST00000555114 IGKV1D-43A0A0B4J1Z2 117 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 A0A1W2PPL8 197 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 A6NIZ1 184 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 A8MXK9 166 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 NGFP01138 241 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 RNASE1P07998 156 aaKnown RBP13.06□□□□□ -0.32
NEDD1-207ENST00000555114 MSR1P21757 451 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 CPT2P23786 658 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 SLC6A9P48067 706 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 RAP1BP61224 184 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 RPL27P61353 136 aaKnown RBP13.06□□□□□ -0.32
NEDD1-207ENST00000555114 RAP1AP62834 184 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 SCRN3Q0VDG4 424 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 PIN1Q13526 163 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-207ENST00000555114 LAPTM4AQ15012 233 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 ZNF774Q6NX45 483 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 BTNL3Q6UXE8 466 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 TREML4Q6UXN2 200 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-207ENST00000555114 ZNF283Q8N7M2 679 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 OR2Z1Q8NG97 314 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 DUX5Q96PT3 197 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 TBCCD1Q9NVR7 557 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 IL19Q9UHD0 177 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 IL20RAQ9UHF4 553 aa13.06□□□□□ -0.32
NEDD1-207ENST00000555114 PPP1R3CQ9UQK1 317 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms