RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ZNF85Q03923 595 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 SCRN3Q0VDG4 424 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 MRPL28Q13084 256 aaKnown RBP12.63□□□□□ -0.39
SHOX2-206ENST00000554685 EIF2B1Q14232 305 aaKnown RBP12.63□□□□□ -0.39
SHOX2-206ENST00000554685 P2RY6Q15077 328 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 MEP1BQ16820 701 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
SHOX2-206ENST00000554685 ANKRD16Q6P6B7 361 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 FAM220AQ7Z4H9 259 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 LHFPL3Q86UP9 236 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 CCDC36Q8IYA8 594 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 NANOGP1Q8N7R0 232 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 NAXEQ8NCW5 288 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 C1orf162Q8NEQ5 155 aaPredicted RBP12.63□□□□□ -0.39
SHOX2-206ENST00000554685 GJC3Q8NFK1 279 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 OR52N5Q8NH56 324 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 NANOS1Q8WY41 292 aaKnown RBP12.63□□□□□ -0.39
SHOX2-206ENST00000554685 RORBQ92753 470 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF837Q96EG3 531 aaPredicted RBP12.63□□□□□ -0.39
SHOX2-206ENST00000554685 C1orf198Q9H425 327 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 EMC7Q9NPA0 242 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 CYB5R1Q9UHQ9 305 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 SPTA1P02549 2419 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
SHOX2-206ENST00000554685 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 CIB4A0PJX0 185 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 CCL21O00585 134 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF254O75437 659 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 SULT1C4O75897 302 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 KRT8P05787 483 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 ITGA5P08648 1049 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 JUNBP17275 347 aaPredicted RBP12.62□□□□□ -0.39
SHOX2-206ENST00000554685 COX5AP20674 150 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 PCMT1P22061 227 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 MAP2K4P45985 399 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 RPL5P46777 297 aaKnown RBP12.62□□□□□ -0.39
SHOX2-206ENST00000554685 SPHARQ15513 63 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 NEDD8Q15843 81 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 SLC36A2Q495M3 483 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 CDONQ4KMG0 1287 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 UBE2UQ5VVX9 321 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF322Q6U7Q0 402 aaPredicted RBP12.62□□□□□ -0.39
SHOX2-206ENST00000554685 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 SLC16A14Q7RTX9 510 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 OR1K1Q8NGR3 316 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 MARVELD3Q96A59 401 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF416Q9BWM5 594 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 GALNT8Q9NY28 637 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 Q9UFV3 132 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 GDF2Q9UK05 429 aaPredicted RBP12.62□□□□□ -0.39
SHOX2-206ENST00000554685 COPS3Q9UNS2 423 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 GTF3C1Q12789 2109 aa12.62□□□□□ -0.39
SHOX2-206ENST00000554685 B8ZZF3 427 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 PTHP01270 115 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 SCG5P05408 212 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 IGHV1-2P23083 117 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 HOXC12P31275 282 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 TTKP33981 857 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 HCCSP53701 268 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 TAS2R43P59537 309 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 BDH1Q02338 343 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ROM1Q03395 351 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 BLMHQ13867 455 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ENDOGQ14249 297 aaKnown RBP12.61□□□□□ -0.39
SHOX2-206ENST00000554685 MED22Q15528 200 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 C1QTNF12Q5T7M4 302 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF544Q6NX49 715 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 KLHL24Q6TFL4 600 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 KRT77Q7Z794 578 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 LINC00346Q8IVM7 164 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 GABRG1Q8N1C3 465 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 C17orf78Q8N4C9 275 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF610Q8N9Z0 462 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ASB5Q8WWX0 329 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 MUL1Q969V5 352 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 BOD1Q96IK1 185 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 OR8B4Q96RC9 309 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF649Q9BS31 505 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ABHD6Q9BV23 337 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 MROQ9BYG7 248 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ISYNA1Q9NPH2 558 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 COQ3Q9NZJ6 369 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 ASH2LQ9UBL3 628 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 CLEC2DQ9UHP7 191 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 IKZF2Q9UKS7 526 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 LHFPL6Q9Y693 200 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 SVILO95425 2214 aa12.61□□□□□ -0.39
SHOX2-206ENST00000554685 METTL15A6NJ78 407 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 EEF1E1-BLOC1S5C9J1V9 151 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 ZNF878C9JN71 531 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 J3QLW9 94 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 EEF1E1O43324 174 aaKnown RBP12.6□□□□□ -0.39
SHOX2-206ENST00000554685 SEC14L2O76054 403 aa12.6□□□□□ -0.39
SHOX2-206ENST00000554685 UBL3O95164 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms