RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 IGKV5-2P06315 115 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 UQCRFS1P1P0C7P4 283 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 TBPP20226 339 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 CCNCP24863 283 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 PRDX3P30048 256 aaKnown RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 ZNF133P52736 654 aaPredicted RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 RPL23AP62750 156 aaKnown RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 KIAA0087Q14695 138 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 PRAMEF5Q5TYX0 476 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 PRAMEF6Q5VXH4 476 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 CNIH2Q6PI25 160 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 C6orf89Q6UWU4 347 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 PLA2G4DQ86XP0 818 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 UBALD2Q8IYN6 164 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 ZNF433Q8N7K0 673 aaPredicted RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 OR9K2Q8NGE7 335 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 RNF139Q8WU17 664 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 ACOT11Q8WXI4 607 aaPredicted RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 FGF14Q92915 247 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 OR8B4Q96RC9 309 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 OR11A1Q9GZK7 315 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 GBA3Q9H227 469 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 CLMPQ9H6B4 373 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 NIPAL2Q9H841 368 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 EML4Q9HC35 981 aaKnown RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 ZNF225Q9UK10 706 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 PEX16Q9Y5Y5 336 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 SLC25A15Q9Y619 301 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 SPEF2Q9C093 1822 aa3.4□□□□□ -1.87
CHD8-207ENST00000554384 ANKRD17O75179 2603 aaKnown RBP3.4□□□□□ -1.87
CHD8-207ENST00000554384 A0A0G2JN53 185 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 FAM240BA0A1B0GVZ2 78 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 UBXN8O00124 270 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 SNAI1O95863 264 aaPredicted RBP3.39□□□□□ -1.87
CHD8-207ENST00000554384 IGHV4-34P06331 123 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 DCNP07585 359 aaKnown RBP3.39□□□□□ -1.87
CHD8-207ENST00000554384 KITLGP21583 273 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 CASP14P31944 242 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 SULT1E1P49888 294 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 SH3BGRP55822 239 aaPredicted RBP3.39□□□□□ -1.87
CHD8-207ENST00000554384 FZD2Q14332 565 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 PSG5Q15238 335 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 TRIM40Q6P9F5 258 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 KDM7AQ6ZMT4 941 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 ZNF621Q6ZSS3 439 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 TGIF2LXQ8IUE1 241 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 EGFL6Q8IUX8 553 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 CDH26Q8IXH8 852 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 MYOCDQ8IZQ8 938 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 MED8Q96G25 268 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 RNF185Q96GF1 192 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 NRTNQ99748 197 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 RARRES2Q99969 163 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 NRIP2Q9BQI9 281 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 RIOK2Q9BVS4 552 aaKnown RBP3.39□□□□□ -1.87
CHD8-207ENST00000554384 TMEM59Q9BXS4 323 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 DEFB127Q9H1M4 99 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 ASB8Q9H765 288 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 NT5MQ9NPB1 228 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 MYO18BQ8IUG5 2567 aa3.39□□□□□ -1.87
CHD8-207ENST00000554384 LOC285556D6RIA3 1793 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 CNOT1A5YKK6 2376 aaKnown RBP3.38□□□□□ -1.87
CHD8-207ENST00000554384 IGKV1D-13A0A0B4J2D9 117 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 A6NDX4 124 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 TRIM64CA6NLI5 447 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 PSTPIP1O43586 416 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 PALMO75781 387 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 TMEM50AO95807 157 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 CST1P01037 141 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 ALDOBP05062 364 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 IGKV1-13P0DP09 117 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 ATP5C1P36542 298 aaKnown RBP3.38□□□□□ -1.87
CHD8-207ENST00000554384 FDFT1P37268 417 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 LHX2P50458 406 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 GNMTQ14749 295 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 CYTH1Q15438 398 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 CAVIN4Q5BKX8 364 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 FAM228AQ86W67 206 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 ZADH2Q8N4Q0 377 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 FAM71E2Q8N5Q1 922 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 Q8N9W7 124 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 SLC22A8Q8TCC7 542 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 IL22RA2Q969J5 263 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 SLC35E1Q96K37 410 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 CNDP1Q96KN2 507 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 OR2M2Q96R28 347 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 SORT1Q99523 831 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 RIOK1Q9BRS2 568 aaKnown RBP3.38□□□□□ -1.87
CHD8-207ENST00000554384 IL26Q9NPH9 171 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 ZNF331Q9NQX6 463 aaPredicted RBP3.38□□□□□ -1.87
CHD8-207ENST00000554384 KLHL28Q9NXS3 571 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 SPATA7Q9P0W8 599 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 DEC1Q9P2X7 70 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 CSDC2Q9Y534 153 aaKnown RBP3.38□□□□□ -1.87
CHD8-207ENST00000554384 HEBP2Q9Y5Z4 205 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 DSPP15924 2871 aaKnown RBP3.38□□□□□ -1.87
CHD8-207ENST00000554384 SMG1Q96Q15 3661 aaKnown RBP3.38□□□□□ -1.87
CHD8-207ENST00000554384 PTPRFP10586 1907 aa3.38□□□□□ -1.87
CHD8-207ENST00000554384 ASTN1O14525 1302 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms