RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	IFNA8	P32881	189 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	PCGF2	P35227	344 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ACAA2	P42765	397 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	OR1E2	P47887	323 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	RASSF2	P50749	326 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	SLC7A2	P52569	658 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	F2RL1	P55085	397 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	DLX5	P56178	289 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TAS2R41	P59536	307 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TLE4	Q04727	773 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	RBBP4	Q09028	425 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	C1D	Q13901	141 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TSC22D1	Q15714	1073 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	DUSP7	Q16829	419 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TMEM44	Q2T9K0	475 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CTU2	Q2VPK5	515 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CYBRD1	Q53TN4	286 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	SYT14P1	Q58G82	188 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	EEF1A1P5	Q5VTE0	462 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	C9orf135	Q5VTT2	229 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	PRAMEF8	Q5VWM4	474 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	PRAMEF7	Q5VXH5	474 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	GLYAT	Q6IB77	296 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	C3orf33	Q6P1S2	294 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ERICH5	Q6P6B1	374 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TTC33	Q6PID6	262 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TMPPE	Q6ZT21	453 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	HIST3H2A	Q7L7L0	130 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	NUFIP2	Q7Z417	695 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	PIGW	Q7Z7B1	504 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CARM1	Q86X55	608 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	PTOV1	Q86YD1	416 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	RBM45	Q8IUH3	476 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	MICU2	Q8IYU8	434 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	KDM8	Q8N371	416 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TMEM99	Q8N816	258 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	RELL2	Q8NC24	303 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ABHD3	Q8WU67	409 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	LZIC	Q8WZA0	190 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	HIST1H2AC	Q93077	130 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	RNASE6	Q93091	150 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CPNE4	Q96A23	557 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	STARD4	Q96DR4	205 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	SLC47A1	Q96FL8	570 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ARL5B	Q96KC2	179 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF583	Q96ND8	569 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZFP3	Q96NJ6	502 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF300	Q96RE9	604 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CDRT15	Q96T59	188 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	HOPX	Q9BPY8	73 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CENPO	Q9BU64	300 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	MED18	Q9BUE0	208 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	SFXN3	Q9BWM7	321 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	PIGM	Q9H3S5	423 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	TMEM38A	Q9H6F2	299 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	KAT8	Q9H7Z6	458 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	FANCF	Q9NPI8	374 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	EXOSC3	Q9NQT5	275 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CYSLTR2	Q9NS75	346 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CMTM6	Q9NX76	183 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	CLCF1	Q9UBD9	225 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	NOSIP	Q9Y314	301 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF175	Q9Y473	711 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570		V9GYQ6	96 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	USP9Y	O00507	2555 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	BSN	Q9UPA5	3926 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	LRRK2	Q5S007	2527 aa		4.12	□□□□□ -1.75
ATXN3-222	ENST00000553570	HECTD1	Q9ULT8	2610 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	AKAP6	Q13023	2319 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	SMG1	Q96Q15	3661 aa	Known RBP	4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570		A0A1B0GWA3	101 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570		A8MXE2	369 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570		A8MZ25	164 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	C11orf98	E9PRG8	122 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	C16orf97	H3BN30	126 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	MRPL33	O75394	65 aa	Known RBP	4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	STAMBP	O95630	424 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	LGI1	O95970	557 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	CH25H	O95992	272 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	SERPINA1	P01009	418 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	CRH	P06850	196 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	PNMT	P11086	282 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	RPS4Y1	P22090	263 aa	Known RBP	4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	IL32	P24001	234 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	FKBP2	P26885	142 aa	Known RBP	4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	ELK4	P28324	431 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	KDELR2	P33947	212 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	CD79B	P40259	229 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	PSMB10	P40306	273 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	CLK1	P49759	484 aa	Known RBP	4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	MNAT1	P51948	309 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	P2RX3	P56373	397 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	ITGAD	Q13349	1161 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	PMS2P3	Q13401	168 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	IRF3	Q14653	427 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	STK11	Q15831	433 aa		4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	ZNF239	Q16600	458 aa	Known RBP	4.11	□□□□□ -1.75
ATXN3-222	ENST00000553570	C2orf68	Q2NKX9	166 aa		4.11	□□□□□ -1.75

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