RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 LRRTM2O43300 516 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 PLPP2O43688 288 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 SS18L1O75177 396 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 EDNRAP25101 427 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 PSMB10P40306 273 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 CRYBB2P43320 205 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 TGM4P49221 684 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 VBP1P61758 197 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 NCS1P62166 190 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 LSM6P62312 80 aaKnown RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 SIRPAP78324 504 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 MRPS34P82930 218 aaKnown RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 MRPL28Q13084 256 aaKnown RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 CDK5R1Q15078 307 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 ACSF3Q4G176 576 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 CCDC58Q4VC31 144 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 LIPNQ5VXI9 398 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 DMKNQ6E0U4 476 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 CORO6Q6QEF8 472 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 ARL9Q6T311 187 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 LRRN1Q6UXK5 716 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 RPTNQ6XPR3 784 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 NUFIP2Q7Z417 695 aaKnown RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 ZNF679Q8IYX0 411 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 CISD2Q8N5K1 135 aaKnown RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 KDF1Q8NAX2 398 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 APH1AQ96BI3 265 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 ZNF837Q96EG3 531 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 GMPPAQ96IJ6 420 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-206ENST00000553447 ELOVL3Q9HB03 270 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 PTTG2Q9NZH5 202 aa15.51■□□□□ 0.07
PSEN1-206ENST00000553447 DOCK7Q96N67 2140 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 A0A1W2PPW3 197 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 KRT33AO76009 404 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 WNT11O96014 354 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 CD53P19397 219 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 NPR2P20594 1047 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 ROR2Q01974 943 aaKnown RBP15.5■□□□□ 0.07
PSEN1-206ENST00000553447 SPCS2Q15005 226 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 SF3B4Q15427 424 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■■□□ 16.5
PSEN1-206ENST00000553447 STK11Q15831 433 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 CEACAM16Q2WEN9 425 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 SOWAHCQ53LP3 525 aaPredicted RBP15.5■□□□□ 0.07
PSEN1-206ENST00000553447 ZNF585AQ6P3V2 769 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 RPL22L1Q6P5R6 122 aaKnown RBP15.5■□□□□ 0.07
PSEN1-206ENST00000553447 GDPGP1Q6ZNW5 385 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 SPATC1Q76KD6 591 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 KRT77Q7Z794 578 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 ALDH16A1Q8IZ83 802 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 OR2AJ1Q8NGZ0 328 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 WNT2BQ93097 391 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 TMEM203Q969S6 136 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 RNF166Q96A37 237 aaPredicted RBP15.5■□□□□ 0.07
PSEN1-206ENST00000553447 MAP6Q96JE9 813 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 CENPOQ9BU64 300 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 ZNF416Q9BWM5 594 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 MROQ9BYG7 248 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 C1orf198Q9H425 327 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 SLC7A10Q9NS82 523 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 TMEM38BQ9NVV0 291 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 GDF2Q9UK05 429 aaPredicted RBP15.5■□□□□ 0.07
PSEN1-206ENST00000553447 SSR3Q9UNL2 185 aa15.5■□□□□ 0.07
PSEN1-206ENST00000553447 NCOA6Q14686 2063 aaPredicted RBP15.49■□□□□ 0.07
PSEN1-206ENST00000553447 RPP14O95059 124 aaKnown RBP15.49■□□□□ 0.07
PSEN1-206ENST00000553447 IGHV3-9P01782 118 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 PCSK6P29122 969 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 TGFBR1P36897 503 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 TDGF1P3P51864 188 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 SLC3A1Q07837 685 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 NFATC3Q12968 1075 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 ENDOGQ14249 297 aaKnown RBP15.49■□□□□ 0.07
PSEN1-206ENST00000553447 CD200R1LQ6Q8B3 271 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 DEGS2Q6QHC5 323 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 ZNF100Q8IYN0 542 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 TEX19Q8NA77 164 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 RPS4Y2Q8TD47 263 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 RNF133Q8WVZ7 376 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 SLAMF6Q96DU3 332 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 SMIM19Q96E16 107 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 TRMT61AQ96FX7 289 aaKnown RBP15.49■□□□□ 0.07
PSEN1-206ENST00000553447 PGLYRP3Q96LB9 341 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 TM9SF2Q99805 663 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 TMED9Q9BVK6 235 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 EXOSC4Q9NPD3 245 aaKnown RBP15.49■□□□□ 0.07
PSEN1-206ENST00000553447 ASH2LQ9UBL3 628 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 LRP12Q9Y561 859 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 FREM1Q5H8C1 2179 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 CACNA1AO00555 2505 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 ANKRD11Q6UB99 2663 aaPredicted RBP15.49■□□□□ 0.07
PSEN1-206ENST00000553447 IGF2RP11717 2491 aa15.49■□□□□ 0.07
PSEN1-206ENST00000553447 CACNA1GO43497 2377 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 TRBV2A0A0J9YWF9 115 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 TRDV1A0A1B0GX56 115 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 CD8B2A6NJW9 211 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 RPL36A-HNRNPH2H7BZ11 118 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 ZNF254O75437 659 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 CD1AP06126 327 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 TPOP07202 933 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 GABRA1P14867 456 aa15.48■□□□□ 0.07
PSEN1-206ENST00000553447 GDI2P50395 445 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms