RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 TIPRLO75663 272 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 TUSC2O75896 110 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 PMS2P2O95744 297 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 IL11P20809 199 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 TCEA1P23193 301 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 MPGP29372 298 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 SFTPDP35247 375 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 ACVR1BP36896 505 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 UGT2B15P54855 530 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 CTBP2P56545 445 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 CLDN15P56746 228 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 CLDN20P56880 219 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 SPIBQ01892 262 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 PRKCDQ05655 676 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 CTU2Q2VPK5 515 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 FAM120AOSQ5T036 256 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 DCST1Q5T197 706 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 PDSS1Q5T2R2 415 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 C1orf185Q5T7R7 199 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 C1orf140Q5VVS0 124 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 NKAIN4Q8IVV8 208 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 PM20D2Q8IYS1 436 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 LINC00471Q8N535 108 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 RFLNBQ8N5W9 214 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 OR4C15Q8NGM1 316 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 ZPLD1Q8TCW7 415 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 TMEM255BQ8WV15 326 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 LIPHQ8WWY8 451 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 NRBF2Q96F24 287 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 CENPNQ96H22 339 aaPredicted RBP5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 WDYHV1Q96HA8 205 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 ADGRG7Q96K78 797 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 ARL5BQ96KC2 179 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 KLHL15Q96M94 604 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 PSD2Q9BQI7 771 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 QTRT1Q9BXR0 403 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 KLHL4Q9C0H6 718 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 EXO5Q9H790 373 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 DCLRE1BQ9H816 532 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 REEP1Q9H902 201 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 SMURF2Q9HAU4 748 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 MEPEQ9NQ76 525 aaPredicted RBP5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 RHCGQ9UBD6 479 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 MED31Q9Y3C7 131 aa5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 SAMHD1Q9Y3Z3 626 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-210ENST00000551642 TENM2Q9NT68 2774 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 TRBV4-1A0A0J9YWV2 114 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 LIPT2A6NK58 231 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 FTCDNL1E5RQL4 147 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 H0YHG0 523 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 TNFRSF11BO00300 401 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 GNGT2O14610 69 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 TNFSF11O14788 317 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 MGRN1O60291 552 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 WDR1O75083 606 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 AHSA1O95433 338 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 MT-ATP6P00846 226 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 GABRA1P14867 456 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 CCNA2P20248 432 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 SHC1P29353 583 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 IDUAP35475 653 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 IFNGR2P38484 337 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 STARP49675 285 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 DIO1P49895 249 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 ARHGDIAP52565 204 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 SUCLG1P53597 346 aaKnown RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 RPS3AP61247 264 aaKnown RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 CSNK2A1P68400 391 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 H3F3AP84243 136 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 RIPK1Q13546 671 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 RAB32Q13637 225 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 MFSD13AQ14CX5 517 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 SF3B4Q15427 424 aaKnown RBP eCLIP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 SEC23BQ15437 767 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF239Q16600 458 aaKnown RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 MICAQ29983 383 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 TMEM176BQ3YBM2 270 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 PLA1AQ53H76 456 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 FGD3Q5JSP0 725 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 FAM69AQ5T7M9 428 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 WLSQ5T9L3 541 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF770Q6IQ21 691 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 C1orf94Q6P1W5 598 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 SHQ1Q6PI26 577 aaKnown RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF730Q6ZMV8 503 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 TMPPEQ6ZT21 453 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 TMPRSS11FQ6ZWK6 438 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 RRM2BQ7LG56 351 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 SVOPLQ8N434 492 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 PNLDC1Q8NA58 520 aaKnown RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 C9orf106Q8NAJ2 232 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 OR52J3Q8NH60 311 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 OR2V1Q8NHB1 315 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 MFSD8Q8NHS3 518 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 PPP1R35Q8TAP8 253 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 LRTOMTQ8WZ04 291 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 TAAR8Q969N4 342 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 CPNE4Q96A23 557 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 BPIFA2Q96DR5 249 aa5.63□□□□□ -1.51
DEPDC4-210ENST00000551642 KTI12Q96EK9 354 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms