RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ITGA2P17301 1181 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 RBMXP38159 391 aaKnown RBP11.34□□□□□ -0.59
CPSF6-204ENST00000547486 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
CPSF6-204ENST00000547486 GPR4P46093 362 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF81P51508 661 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 RAP1BP61224 184 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 RAP1AP62834 184 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 MOGQ16653 247 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 ANKDD1AQ495B1 522 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 LIPNQ5VXI9 398 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 MBNL2Q5VZF2 373 aaKnown RBP11.34□□□□□ -0.59
CPSF6-204ENST00000547486 OTPQ5XKR4 325 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 FAM205BPQ63HN1 556 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 ZNF730Q6ZMV8 503 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 C1orf229Q6ZS94 237 aaPredicted RBP11.34□□□□□ -0.59
CPSF6-204ENST00000547486 ABHD4Q8TB40 342 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 FNDC8Q8TC99 324 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 Q96M85 177 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 METTL17Q9H7H0 456 aaPredicted RBP11.34□□□□□ -0.59
CPSF6-204ENST00000547486 EFCAB1Q9HAE3 211 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 NMNAT1Q9HAN9 279 aaPredicted RBP11.34□□□□□ -0.59
CPSF6-204ENST00000547486 EMC7Q9NPA0 242 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 POLE4Q9NR33 117 aa11.34□□□□□ -0.59
CPSF6-204ENST00000547486 GMNCA6NCL1 334 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 IMPA2O14732 288 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 PLPP2O43688 288 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 ICMTO60725 284 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 CCDC22O60826 627 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 DEAF1O75398 565 aaPredicted RBP11.33□□□□□ -0.6
CPSF6-204ENST00000547486 CD14P08571 375 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 NR2C1P13056 603 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 MSR1P21757 451 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 GCH1P30793 250 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
CPSF6-204ENST00000547486 SLC9A3P48764 834 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 PPP1CBP62140 327 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 ZBED5Q49AG3 693 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 MESTQ5EB52 335 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 FAHD2BQ6P2I3 314 aaPredicted RBP11.33□□□□□ -0.6
CPSF6-204ENST00000547486 FAM122BQ7Z309 247 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 ALDH16A1Q8IZ83 802 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 FAM156AQ8NDB6 213 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 OR51F2Q8NH61 342 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 SLC7A13Q8TCU3 470 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 FAHD2AQ96GK7 314 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 C4orf45Q96LM5 186 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 POFUT1Q9H488 388 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 ZNF665Q9H7R5 613 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 SAP30LQ9HAJ7 183 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 G6PC2Q9NQR9 355 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 GRHPRQ9UBQ7 328 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 WIPI2Q9Y4P8 454 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 ENPP4Q9Y6X5 453 aa11.33□□□□□ -0.6
CPSF6-204ENST00000547486 C12orf71A8MTZ7 269 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 UBOX5O94941 541 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 VENTXO95231 258 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 MPZL1O95297 269 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 MT-ND5P03915 603 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 CTLA4P16410 223 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 PCMT1P22061 227 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 GUCA1AP43080 201 aaPredicted RBP11.32□□□□□ -0.6
CPSF6-204ENST00000547486 PCBD1P61457 104 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 TEKQ02763 1124 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 PSG7Q13046 419 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 HFEQ30201 348 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 ACSM5Q6NUN0 579 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 HACD2Q6Y1H2 254 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 THSD4Q6ZMP0 1018 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 SYT9Q86SS6 491 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 FAM86B1Q8N7N1 296 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 CCL17Q92583 94 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 RASD2Q96D21 266 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 FAM46AQ96IP4 442 aaKnown RBP11.32□□□□□ -0.6
CPSF6-204ENST00000547486 KCTD14Q9BQ13 255 aaPredicted RBP11.32□□□□□ -0.6
CPSF6-204ENST00000547486 MSL2Q9HCI7 577 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 NDUFAF4Q9P032 175 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 EGFL7Q9UHF1 273 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 IL20RAQ9UHF4 553 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 GRIP1Q9Y3R0 1128 aa11.32□□□□□ -0.6
CPSF6-204ENST00000547486 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 A0A1W2PRQ8 180 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 PRSS37A4D1T9 235 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 CLDN25C9JDP6 229 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 OMPP47874 163 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 LIMS1P48059 325 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 NUDT2P50583 147 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 FXYD6P3P58550 94 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 PSME3P61289 254 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 DGCR6Q14129 220 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 SEC23BQ15437 767 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 FAM209AQ5JX71 171 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 UNQ6126/PRO20091Q6UXV3 157 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 ZNF771Q7L3S4 317 aaPredicted RBP11.31□□□□□ -0.6
CPSF6-204ENST00000547486 SLC7A6Q92536 515 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 FAM162AQ96A26 154 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 C7orf34Q96L11 122 aa11.31□□□□□ -0.6
CPSF6-204ENST00000547486 GPA33Q99795 319 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms