RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 KIR3DP1A8MWS1 328 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 GPRIN2O60269 458 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 GATBO75879 557 aaKnown RBP11.37□□□□□ -0.59
SCAF11-209ENST00000547018 DXOO77932 396 aaKnown RBP11.37□□□□□ -0.59
SCAF11-209ENST00000547018 PATE4P0C8F1 98 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 CFL1P23528 166 aaKnown RBP11.37□□□□□ -0.59
SCAF11-209ENST00000547018 RBMS1P29558 406 aaKnown RBP11.37□□□□□ -0.59
SCAF11-209ENST00000547018 HOXD12P35452 270 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 FOLR3P41439 243 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 POU3F4P49335 361 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 ART1P52961 327 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 DHRS13Q6UX07 377 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 CHMP1BQ7LBR1 199 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 WDSUB1Q8N9V3 476 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 OR11G2Q8NGC1 345 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 OR8B4Q96RC9 309 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 SPATA2Q9UM82 520 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 HSPB11Q9Y547 144 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 IGLV1-36A0A0B4J1U3 117 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 TP53I11O14683 189 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 PDCD5O14737 125 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 PLATP00750 562 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 ITGA5P08648 1049 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 CHAF1BQ13112 559 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 LINC00696Q6ZRV3 163 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 SLC26A10Q8NG04 563 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 OR13C9Q8NGT0 318 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 SLC25A38Q96DW6 304 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 FARSAQ9Y285 508 aaKnown RBP11.37□□□□□ -0.59
SCAF11-209ENST00000547018 DCHS1Q96JQ0 3298 aa11.37□□□□□ -0.59
SCAF11-209ENST00000547018 AIPO00170 330 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 TCRBP04435 133 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 CD2P06729 351 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 IFI6P09912 130 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 HSD11B1P28845 292 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 CRABP1P29762 137 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 HSF2Q03933 536 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 IL10RAQ13651 578 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 CCDC58Q4VC31 144 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 ACBD4Q8NC06 268 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 POC1BQ8TC44 478 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
SCAF11-209ENST00000547018 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 TGIF2Q9GZN2 237 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 DPAGT1Q9H3H5 408 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 ELL3Q9HB65 397 aaPredicted RBP11.36□□□□□ -0.59
SCAF11-209ENST00000547018 PADI1Q9ULC6 663 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 LOC107986453A0A1B0GWG9 222 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 HMX3A6NHT5 357 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 LIPT2A6NK58 231 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 NPIPB7O75200 414 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 ABHD16AO95870 558 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 QDPRP09417 244 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 SPINK2P20155 84 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 APOBEC1P41238 236 aaKnown RBP11.36□□□□□ -0.59
SCAF11-209ENST00000547018 GUCA1AP43080 201 aaPredicted RBP11.36□□□□□ -0.59
SCAF11-209ENST00000547018 VEGFCP49767 419 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 PLPPR5Q32ZL2 321 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 KLHL24Q6TFL4 600 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 RAB11FIP2Q7L804 512 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 NAA40Q86UY6 237 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 ESX1Q8N693 406 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 OR14L1PQ8NHC6 308 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 EVA1AQ9H8M9 152 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 AKAP7Q9P0M2 348 aaPredicted RBP11.36□□□□□ -0.59
SCAF11-209ENST00000547018 LOXL2Q9Y4K0 774 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 TRAV1-2A0A0B4J238 106 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 LNP1A1A4G5 178 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 FTCDNL1E5RQL4 147 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 TNFSF11O14788 317 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 UBL3O95164 117 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 DHFRP00374 187 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 CCDC92Q53HC0 331 aaPredicted RBP11.36□□□□□ -0.59
SCAF11-209ENST00000547018 OR2AJ1Q8NGZ0 328 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 NUBPLQ8TB37 319 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 ZNF519Q8TB69 540 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 HGDQ93099 445 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 ABRACLQ9P1F3 81 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 CKLFQ9UBR5 152 aa11.36□□□□□ -0.59
SCAF11-209ENST00000547018 ARPC1BO15143 372 aaKnown RBP11.35□□□□□ -0.59
SCAF11-209ENST00000547018 NOS1APO75052 506 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-209ENST00000547018 KLF7O75840 302 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-209ENST00000547018 CXCL3P19876 107 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 DUSP3P51452 185 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-209ENST00000547018 PCOLCEQ15113 449 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 NKPD1Q17RQ9 610 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 ZNF385CQ66K41 422 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-209ENST00000547018 ZNF227Q86WZ6 799 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 BATF2Q8N1L9 274 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 OR51E1Q8TCB6 317 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 FCAMRQ8WWV6 532 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 ASB10Q8WXI3 467 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 ST8SIA1Q92185 356 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 TRIM63Q969Q1 353 aa11.35□□□□□ -0.59
SCAF11-209ENST00000547018 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
SCAF11-209ENST00000547018 SOSTQ9BQB4 213 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms