RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 PLEKHA8Q96JA3 519 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 CIB1Q99828 191 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 NELFAQ9H3P2 528 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 RNF121Q9H920 327 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 SLC25A19Q9HC21 320 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 CMC2Q9NRP2 79 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 LAMP3Q9UQV4 416 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 FKBP7Q9Y680 259 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 ROS1P08922 2347 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 M0R1B8 84 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 SPRY1O43609 319 aaPredicted RBP11.64□□□□□ -0.55
RAB5B-203ENST00000546810 RAB36O95755 333 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 PLAUP00749 431 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 ANPEPP15144 967 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 CBR1P16152 277 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 PTAFRP25105 342 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 LAP3P28838 519 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 ARR3P36575 388 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 ZNF83P51522 516 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 ALDH3A2P51648 485 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 PCBD1P61457 104 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 ELF3P78545 371 aaPredicted RBP11.64□□□□□ -0.55
RAB5B-203ENST00000546810 CDK5Q00535 292 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 GSG1Q2KHT4 349 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 TMEM53Q6P2H8 277 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 ZBTB49Q6ZSB9 765 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 IQCF1Q8N6M8 205 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 SLC37A3Q8NCC5 494 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 OR2T4Q8NH00 348 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 KCNS3Q9BQ31 491 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 WACQ9BTA9 647 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 NUAK2Q9H093 628 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 RACGAP1Q9H0H5 632 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 DCLRE1BQ9H816 532 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 SRA1Q9HD15 236 aaKnown RBP11.64□□□□□ -0.55
RAB5B-203ENST00000546810 CCNB1IP1Q9NPC3 277 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 RPRD1BQ9NQG5 326 aaKnown RBP11.64□□□□□ -0.55
RAB5B-203ENST00000546810 USE1Q9NZ43 259 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 B9D1Q9UPM9 204 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 UGT2A1Q9Y4X1 527 aa11.64□□□□□ -0.55
RAB5B-203ENST00000546810 C12orf71A8MTZ7 269 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 OVOL3O00110 214 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 EI24O14681 340 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 MITFO75030 526 aaPredicted RBP11.63□□□□□ -0.55
RAB5B-203ENST00000546810 PTHP01270 115 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 HLA-HP01893 362 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 CD3EP07766 207 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 CTLA4P16410 223 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 MSR1P21757 451 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 CDAP32320 146 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 TUBA1BP68363 451 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 TUBA4AP68366 448 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 GLO1Q04760 184 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 PLP2Q04941 152 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 PTGES3Q15185 160 aaKnown RBP11.63□□□□□ -0.55
RAB5B-203ENST00000546810 NCMAPQ5T1S8 102 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 FAM27BQ5VT28 67 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 FOXL2NBQ6ZUU3 175 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 TUBA1AQ71U36 451 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 ZBTB46Q86UZ6 589 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 SKA3Q8IX90 412 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 DEPDC4Q8N2C3 294 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 LRRC18Q8N456 261 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 CBR4Q8N4T8 237 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 PROKR2Q8NFJ6 384 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 RADILQ96JH8 1075 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 SH3GL3Q99963 347 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 C1QTNF6Q9BXI9 259 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 C8orf4Q9NR00 106 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 POLE4Q9NR33 117 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 TMEM160Q9NX00 188 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 LPAR3Q9UBY5 353 aa11.63□□□□□ -0.55
RAB5B-203ENST00000546810 COA3Q9Y2R0 106 aaPredicted RBP11.63□□□□□ -0.55
RAB5B-203ENST00000546810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.558e-7■□□□□ 10.7
RAB5B-203ENST00000546810 OR6C68A6NDL8 312 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 KCNAB3O43448 404 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 GPRIN2O60269 458 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 HLA-DQA2P01906 255 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 ALPLP05186 524 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 CST2P09228 141 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 PTDSS1P48651 473 aaKnown RBP11.62□□□□□ -0.55
RAB5B-203ENST00000546810 BLVRAP53004 296 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 SLC25A1P53007 311 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 RAB1AP62820 205 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 PIGFQ07326 219 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 NPRL3Q12980 569 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 CRMP1Q14194 572 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 SNAPC1Q16533 368 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 TMEM236Q5W0B7 351 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 ACSM5Q6NUN0 579 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 SYT9Q86SS6 491 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 MDP1Q86V88 176 aa11.62□□□□□ -0.55
RAB5B-203ENST00000546810 OR6V1Q8N148 313 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms