RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GSG1LQ6UXU4 331 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 LINC00346Q8IVM7 164 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 STPG2Q8N412 459 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 RELL2Q8NC24 303 aaPredicted RBP14.2□□□□□ -0.14
LDLR-204ENST00000545707 ZNF519Q8TB69 540 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 ZNF587Q96SQ5 575 aaPredicted RBP14.2□□□□□ -0.14
LDLR-204ENST00000545707 MNTQ99583 582 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 GPR27Q9NS67 375 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 TMED7-TICAM2A0A0A6YYA0 188 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 A0A1W2PPC1 479 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 SLC22A23A1A5C7 686 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 FITM1A5D6W6 292 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 RAB3DO95716 219 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 AMY2AP04746 511 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 PPP3CBP16298 524 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 HTR2CP28335 458 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 CCR5P51681 352 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 NR0B2Q15466 257 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 NSDHLQ15738 373 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 C1orf189Q5VU69 101 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 JAGN1Q8N5M9 183 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 OR4S1Q8NGB4 309 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 OR6M1Q8NGM8 313 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 MESP1Q9BRJ9 268 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 TMED7Q9Y3B3 224 aa14.2□□□□□ -0.14
LDLR-204ENST00000545707 HMSDA8MTL9 139 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 PHYHO14832 338 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 SIGLEC5O15389 551 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 NUPL2O15504 423 aaKnown RBP14.19□□□□□ -0.14
LDLR-204ENST00000545707 OR4E1P0C645 316 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 ATF4P18848 351 aaPredicted RBP14.19□□□□□ -0.14
LDLR-204ENST00000545707 FASLGP48023 281 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 SLC6A8P48029 635 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 SIGLEC14Q08ET2 396 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 SGCBQ16585 318 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 NKPD1Q17RQ9 610 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 SCGB2B2Q4G0G5 96 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 HLA-DQA1Q5Y7H0 255 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 ZNF660Q6AZW8 331 aaPredicted RBP14.19□□□□□ -0.14
LDLR-204ENST00000545707 TMEM81Q6P7N7 255 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 ZBTB44Q8NCP5 570 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 SCARB1Q8WTV0 552 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 PELOQ9BRX2 385 aaKnown RBP14.19□□□□□ -0.14
LDLR-204ENST00000545707 MFFQ9GZY8 342 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 TMEM131Q92545 1883 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 SOX1O00570 391 aaPredicted RBP14.19□□□□□ -0.14
LDLR-204ENST00000545707 B3GALNT1O75752 331 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 RLN2P04090 185 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 ABCD3P28288 659 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 GALNSP34059 522 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 NUP62P37198 522 aaPredicted RBP14.19□□□□□ -0.14
LDLR-204ENST00000545707 RIDAP52758 137 aaKnown RBP14.19□□□□□ -0.14
LDLR-204ENST00000545707 SCAND1P57086 179 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 C1orf140Q5VVS0 124 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 FDX2Q6P4F2 183 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 CORO6Q6QEF8 472 aa14.19□□□□□ -0.14
LDLR-204ENST00000545707 TMEM82A0PJX8 343 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 TMEM235A6NFC5 223 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 TSPAN2O60636 221 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 PGCP20142 388 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 LBX1P52954 281 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 GK2Q14410 553 aaPredicted RBP14.18□□□□□ -0.14
LDLR-204ENST00000545707 LY6G6FQ5SQ64 297 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 CATSPERDQ86XM0 798 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 OR1J2Q8NGS2 313 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 SLC41A2Q96JW4 573 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 B3GNT4Q9C0J1 378 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 TXNIPQ9H3M7 391 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 PRMT8Q9NR22 394 aaPredicted RBP14.18□□□□□ -0.14
LDLR-204ENST00000545707 MED11Q9P086 117 aa14.18□□□□□ -0.14
LDLR-204ENST00000545707 MRTO4Q9UKD2 239 aaKnown RBP14.18□□□□□ -0.14
LDLR-204ENST00000545707 IGKV3D-11A0A0A0MRZ8 115 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 TRAV14DV4A0A0A6YYC5 116 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 IGHV3-20A0A0C4DH32 117 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 TUBAL3A6NHL2 446 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 ALG1L2C9J202 215 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 CDK2AP1O14519 115 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 EIF1AYO14602 144 aaKnown RBP14.17□□□□□ -0.14
LDLR-204ENST00000545707 CCSO14618 274 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 ITGB2P05107 769 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 ZP3P21754 424 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 ACHEP22303 614 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 LTBRP36941 435 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 LRRC37A5PQ49AS3 106 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 GLT8D1Q68CQ7 371 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 KCTD18Q6PI47 426 aaPredicted RBP14.17□□□□□ -0.14
LDLR-204ENST00000545707 LANCL3Q6ZV70 420 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 HDDC2Q7Z4H3 204 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 CD163Q86VB7 1156 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 ACBD4Q8NC06 268 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 OR13C3Q8NGS6 347 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 ASB17Q8WXJ9 295 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 CMBLQ96DG6 245 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 CKLFQ9UBR5 152 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 IGKV1D-43A0A0B4J1Z2 117 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 TLCD2A6NGC4 264 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 PLPP3O14495 311 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 MYF5P13349 255 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 PTGS2P35354 604 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 DNASE1L1P49184 302 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms