RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 BIVMQ86UB2 503 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 IGFN1Q86VF2 1251 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 MEX3DQ86XN8 651 aaKnown RBP6.38□□□□□ -1.39
CPSF7-224ENST00000544990 LRRC18Q8N456 261 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 LINC00471Q8N535 108 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 ARIH2OSQ8N7S6 290 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 LRRC75AQ8NAA5 344 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 NUP37Q8NFH4 326 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 OR1J2Q8NGS2 313 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 HDAC2Q92769 488 aaKnown RBP6.38□□□□□ -1.39
CPSF7-224ENST00000544990 LRGUKQ96M69 825 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SH3GL3Q99963 347 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 LRMDAQ9H2I8 198 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 C1orf198Q9H425 327 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 MAGIXQ9H6Y5 334 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF442Q9H7R0 627 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SIAEQ9HAT2 523 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 CCNB1IP1Q9NPC3 277 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 DLL4Q9NR61 685 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 TAS2R1Q9NYW7 299 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF224Q9NZL3 707 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SIGLEC7Q9Y286 467 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 ITPR3Q14573 2671 aa6.38□□□□□ -1.39
CPSF7-224ENST00000544990 SLC22A23A1A5C7 686 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 UNC119BA6NIH7 251 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 H7C1Q1 480 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 H7C417 338 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SSX4O60224 188 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 OR10H3O60404 316 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SLC2A10O95528 541 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 IGHV4-39P01824 125 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ERCC1P07992 297 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-224ENST00000544990 OR4A8P0C604 315 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 PATE4P0C8F1 98 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF35P13682 527 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 NR4A1P22736 598 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 APLNRP35414 380 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 GLRXP35754 106 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 LIMS1P48059 325 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 RPS6KA3P51812 740 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 NUDT6P53370 316 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 DSCR9P59020 149 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 RPS23P62266 143 aaKnown RBP6.37□□□□□ -1.39
CPSF7-224ENST00000544990 HSF2Q03933 536 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 HGFACQ04756 655 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SNTB2Q13425 540 aaKnown RBP6.37□□□□□ -1.39
CPSF7-224ENST00000544990 FHL1Q13642 323 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 RAB39AQ14964 217 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SEC23BQ15437 767 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 EFNB3Q15768 340 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SGCAQ16586 387 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 TBC1D28Q2M2D7 210 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 KRTAP21-3Q3LHN1 58 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 DNAL1Q4LDG9 190 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 FAM98BQ52LJ0 330 aaKnown RBP6.37□□□□□ -1.39
CPSF7-224ENST00000544990 FAM27BQ5VT28 67 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 LCN8Q6JVE9 175 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 KRT80Q6KB66 452 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SLC25A47Q6Q0C1 308 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SMARCD3Q6STE5 483 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 DPY19L2P2Q6ZN68 376 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 MYPOPQ86VE0 399 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF519Q8TB69 540 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 GNPDA2Q8TDQ7 276 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 NSMAFQ92636 917 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ASB9Q96DX5 294 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 RSRC1Q96IZ7 334 aaKnown RBP6.37□□□□□ -1.39
CPSF7-224ENST00000544990 Q96M85 177 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF75AQ96N20 296 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ZNF570Q96NI8 536 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 TSPAN32Q96QS1 320 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 RHNO1Q9BSD3 238 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 FUZQ9BT04 418 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 WACQ9BTA9 647 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 THTPAQ9BU02 230 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 TRIM15Q9C019 465 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 SEC61A2Q9H9S3 476 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 CDH20Q9HBT6 801 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 NOX3Q9HBY0 568 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 NRIP3Q9NQ35 241 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ADAM18Q9Y3Q7 739 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 CMAHPQ9Y471 501 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 ARFGEF3Q5TH69 2177 aa6.37□□□□□ -1.39
CPSF7-224ENST00000544990 IGKV1D-43A0A0B4J1Z2 117 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 A0A1W2PPL8 197 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 PRSS37A4D1T9 235 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 TRIM64A6NGJ6 449 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 TRIM64BA6NI03 449 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 TNFRSF11BO00300 401 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 IMPA2O14732 288 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 GYG2O15488 501 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 NDUFS7O75251 213 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 CST2P09228 141 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 APEHP13798 732 aaKnown RBP6.36□□□□□ -1.39
CPSF7-224ENST00000544990 HOXB6P17509 224 aaKnown RBP6.36□□□□□ -1.39
CPSF7-224ENST00000544990 ATP6V1B2P21281 511 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 MSR1P21757 451 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 SDHAP31040 664 aa6.36□□□□□ -1.39
CPSF7-224ENST00000544990 SLC6A6P31641 620 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms