RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 WNT5AP41221 380 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 LMO4P61968 165 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 PPP1CBP62140 327 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 MVKQ03426 396 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 LIPEQ05469 1076 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 SCRN3Q0VDG4 424 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 SF3A3Q12874 501 aaKnown RBP eCLIP11.18□□□□□ -0.62
RTN3-213ENST00000543552 TSTQ16762 297 aaKnown RBP11.18□□□□□ -0.62
RTN3-213ENST00000543552 SPATA46Q5T0L3 261 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 CGB2Q6NT52 195 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 FOXL2NBQ6ZUU3 175 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 MBOAT2Q6ZWT7 520 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 FKBP9P1Q75LS8 142 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 VTCN1Q7Z7D3 282 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 ZNF101Q8IZC7 436 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 NPEPL1Q8NDH3 523 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 OR4M2Q8NGB6 313 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 ABHD4Q8TB40 342 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 ZNF418Q8TF45 676 aaPredicted RBP11.18□□□□□ -0.62
RTN3-213ENST00000543552 ZFAND2BQ8WV99 257 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 IPCEF1Q8WWN9 437 aaPredicted RBP11.18□□□□□ -0.62
RTN3-213ENST00000543552 MARS2Q96GW9 593 aaKnown RBP11.18□□□□□ -0.62
RTN3-213ENST00000543552 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 TUBG2Q9NRH3 451 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 ARMCX1Q9P291 453 aa11.18□□□□□ -0.62
RTN3-213ENST00000543552 LOC100509620A0A075B734 347 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 IGKV1D-43A0A0B4J1Z2 117 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 J3QLI3 93 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 COX5BP10606 129 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 ITGA2P17301 1181 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 MAKP20794 623 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 TNFSF4P23510 183 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 GATA3P23771 443 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 YAP1P46937 504 aaKnown RBP11.17□□□□□ -0.62
RTN3-213ENST00000543552 MMP15P51511 669 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
RTN3-213ENST00000543552 AVPI1Q5T686 147 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 FAHD2BQ6P2I3 314 aaPredicted RBP11.17□□□□□ -0.62
RTN3-213ENST00000543552 RFPL4BQ6ZWI9 263 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 CBLL1Q75N03 491 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 POU5F2Q8N7G0 328 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 OR13C2Q8NGS9 318 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 KLF14Q8TD94 323 aaPredicted RBP11.17□□□□□ -0.62
RTN3-213ENST00000543552 FAHD2AQ96GK7 314 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 COG8Q96MW5 612 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 OR2J1Q9GZK6 312 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 WNT5BQ9H1J7 359 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 EFCAB1Q9HAE3 211 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 KRCC1Q9NPI7 259 aaPredicted RBP11.17□□□□□ -0.62
RTN3-213ENST00000543552 MAN2C1Q9NTJ4 1040 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 CMTM6Q9NX76 183 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 RHCGQ9UBD6 479 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 WIPI2Q9Y4P8 454 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 NBEAL1Q6ZS30 2694 aa11.17□□□□□ -0.62
RTN3-213ENST00000543552 WNT9BO14905 357 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 SPRY3O43610 288 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 TIMM8AO60220 97 aaPredicted RBP11.16□□□□□ -0.62
RTN3-213ENST00000543552 GMNNO75496 209 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 MPZL1O95297 269 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 ABHD16AO95870 558 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 SERPINA1P01009 418 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 IGHV1-46P01743 117 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 ADH4P08319 380 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 CD14P08571 375 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 COX4I1P13073 169 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 GPR4P46093 362 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 SLC7A2P52569 658 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 GUCY1A3Q02108 690 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 ZBED5Q49AG3 693 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 ZNF774Q6NX45 483 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 HACD2Q6Y1H2 254 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 TMPRSS11FQ6ZWK6 438 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 MEX3DQ86XN8 651 aaKnown RBP11.16□□□□□ -0.62
RTN3-213ENST00000543552 TREML1Q86YW5 311 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 SLC15A3Q8IY34 581 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 LRRC75AQ8NAA5 344 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 CCL17Q92583 94 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 FAM162AQ96A26 154 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 HSH2DQ96JZ2 352 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 C4orf45Q96LM5 186 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 ZNF570Q96NI8 536 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 JMJD8Q96S16 334 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 GAL3ST1Q99999 423 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 KCTD14Q9BQ13 255 aaPredicted RBP11.16□□□□□ -0.62
RTN3-213ENST00000543552 POLE4Q9NR33 117 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 RPS6KA6Q9UK32 745 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 FAM32AQ9Y421 112 aaKnown RBP11.16□□□□□ -0.62
RTN3-213ENST00000543552 SNX13Q9Y5W8 968 aa11.16□□□□□ -0.62
RTN3-213ENST00000543552 A0A087WUU8 490 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 ISPDA4D126 451 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 PRSS37A4D1T9 235 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 J3KTA2 159 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 NME4O00746 187 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 FFAR1O14842 300 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 DOK2O60496 412 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 IGHV2-5P01817 119 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 CD55P08174 381 aa11.15□□□□□ -0.62
RTN3-213ENST00000543552 MPV17P39210 176 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms