RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 ZNF782Q6ZMW2 699 aaPredicted RBP8.85□□□□□ -0.99
SS18-205ENST00000542420 ZNF767PQ75MW2 155 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 SLC35D2Q76EJ3 337 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 ZNF433Q8N7K0 673 aaPredicted RBP8.85□□□□□ -0.99
SS18-205ENST00000542420 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 M1APQ8TC57 530 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 SPACA9Q96E40 222 aaPredicted RBP8.85□□□□□ -0.99
SS18-205ENST00000542420 RADILQ96JH8 1075 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 CDX2Q99626 313 aaPredicted RBP8.85□□□□□ -0.99
SS18-205ENST00000542420 ZNF700Q9H0M5 742 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 SLC25A18Q9H1K4 315 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 B3GNT2Q9NY97 397 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 ATXN7L1Q9ULK2 861 aaPredicted RBP8.85□□□□□ -0.99
SS18-205ENST00000542420 HHLA2Q9UM44 414 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 ING4Q9UNL4 249 aa8.85□□□□□ -0.99
SS18-205ENST00000542420 A0A0A6YYJ9 748 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 LOC100289279A0A1B0GTE1 492 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 LOC390937A0A1W2PQ73 354 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 LINC00862A6NCI5 91 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 C4orf47A7E2U8 309 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 SOX1O00570 391 aaPredicted RBP8.84□□□□□ -0.99
SS18-205ENST00000542420 PEX14O75381 377 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 CSF1P09603 554 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 CD3GP09693 182 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 ANXA3P12429 323 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 MMP16P51512 607 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 TAS2R20P59543 309 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 CD83Q01151 205 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 FOXF1Q12946 379 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 IKZF1Q13422 519 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 KCNMB1Q16558 191 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 GSG1Q2KHT4 349 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 METTL11BQ5VVY1 283 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 TMPRSS12Q86WS5 348 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 CDH26Q8IXH8 852 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 UBE2J2Q8N2K1 259 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 OR2M3Q8NG83 312 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 RNF133Q8WVZ7 376 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 TSEN15Q8WW01 171 aaKnown RBP8.84□□□□□ -0.99
SS18-205ENST00000542420 ASB13Q8WXK3 278 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 ZFP3Q96NJ6 502 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 GFM1Q96RP9 751 aaKnown RBP8.84□□□□□ -0.99
SS18-205ENST00000542420 SLCO5A1Q9H2Y9 848 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 OR51J1Q9H342 316 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 CCDC86Q9H6F5 360 aaKnown RBP8.84□□□□□ -0.99
SS18-205ENST00000542420 PTGES2Q9H7Z7 377 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 HRASLSQ9HDD0 168 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 KLRF1Q9NZS2 232 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 GPN3Q9UHW5 284 aaPredicted RBP8.84□□□□□ -0.99
SS18-205ENST00000542420 DHDHQ9UQ10 334 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 NOSIPQ9Y314 301 aaKnown RBP8.84□□□□□ -0.99
SS18-205ENST00000542420 NPTNQ9Y639 398 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 KIAA1549Q9HCM3 1950 aa8.84□□□□□ -0.99
SS18-205ENST00000542420 TOR1AO14656 332 aa8.83□□□□□ -1
SS18-205ENST00000542420 SCGNO76038 276 aa8.83□□□□□ -1
SS18-205ENST00000542420 TIAF1O95411 115 aa8.83□□□□□ -1
SS18-205ENST00000542420 MELTFP08582 738 aa8.83□□□□□ -1
SS18-205ENST00000542420 SPARCP09486 303 aa8.83□□□□□ -1
SS18-205ENST00000542420 CPN1P15169 458 aa8.83□□□□□ -1
SS18-205ENST00000542420 ZNF250P15622 560 aa8.83□□□□□ -1
SS18-205ENST00000542420 RAB6AP20340 208 aa8.83□□□□□ -1
SS18-205ENST00000542420 PSMB1P20618 241 aaKnown RBP8.83□□□□□ -1
SS18-205ENST00000542420 MC2RQ01718 297 aa8.83□□□□□ -1
SS18-205ENST00000542420 RAB11BQ15907 218 aa8.83□□□□□ -1
SS18-205ENST00000542420 OPN5Q6U736 354 aa8.83□□□□□ -1
SS18-205ENST00000542420 CREB3L2Q70SY1 520 aa8.83□□□□□ -1
SS18-205ENST00000542420 SYT9Q86SS6 491 aa8.83□□□□□ -1
SS18-205ENST00000542420 GLB1L2Q8IW92 636 aa8.83□□□□□ -1
SS18-205ENST00000542420 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
SS18-205ENST00000542420 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.83□□□□□ -1
SS18-205ENST00000542420 OR6M1Q8NGM8 313 aa8.83□□□□□ -1
SS18-205ENST00000542420 IFI44Q8TCB0 444 aa8.83□□□□□ -1
SS18-205ENST00000542420 ST7LQ8TDW4 575 aa8.83□□□□□ -1
SS18-205ENST00000542420 RBP7Q96R05 134 aa8.83□□□□□ -1
SS18-205ENST00000542420 NUDT16L1Q9BRJ7 211 aaKnown RBP8.83□□□□□ -1
SS18-205ENST00000542420 DEFB126Q9BYW3 111 aa8.83□□□□□ -1
SS18-205ENST00000542420 NUDT15Q9NV35 164 aa8.83□□□□□ -1
SS18-205ENST00000542420 LRP12Q9Y561 859 aa8.83□□□□□ -1
SS18-205ENST00000542420 CABIN1Q9Y6J0 2220 aa8.83□□□□□ -1
SS18-205ENST00000542420 FREM3P0C091 2139 aa8.83□□□□□ -1
SS18-205ENST00000542420 COL27A1Q8IZC6 1860 aaPredicted RBP8.83□□□□□ -1
SS18-205ENST00000542420 SNRPGP15A8MWD9 76 aa8.83□□□□□ -1
SS18-205ENST00000542420 D6RAR5 112 aa8.83□□□□□ -1
SS18-205ENST00000542420 H7C417 338 aa8.83□□□□□ -1
SS18-205ENST00000542420 AKR7A2O43488 359 aa8.83□□□□□ -1
SS18-205ENST00000542420 GP1BAP07359 652 aa8.83□□□□□ -1
SS18-205ENST00000542420 SULT1A3P0DMM9 295 aa8.83□□□□□ -1
SS18-205ENST00000542420 SULT1A4P0DMN0 295 aa8.83□□□□□ -1
SS18-205ENST00000542420 GABRA1P14867 456 aa8.83□□□□□ -1
SS18-205ENST00000542420 GIFP27352 417 aa8.83□□□□□ -1
SS18-205ENST00000542420 ZFP36L1Q07352 338 aaKnown RBP8.83□□□□□ -1
SS18-205ENST00000542420 DBPQ10586 325 aaPredicted RBP8.83□□□□□ -1
SS18-205ENST00000542420 PCOLCEQ15113 449 aa8.83□□□□□ -1
SS18-205ENST00000542420 OR7A5Q15622 319 aa8.83□□□□□ -1
SS18-205ENST00000542420 C1orf100Q5SVJ3 147 aa8.83□□□□□ -1
SS18-205ENST00000542420 POMZP3Q6PJE2 187 aa8.83□□□□□ -1
SS18-205ENST00000542420 LUZP2Q86TE4 346 aa8.83□□□□□ -1
SS18-205ENST00000542420 GLCCI1Q86VQ1 547 aa8.83□□□□□ -1
SS18-205ENST00000542420 BMPERQ8N8U9 685 aa8.83□□□□□ -1
SS18-205ENST00000542420 AGBL5Q8NDL9 886 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms