RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CDH11P55287 796 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 CDC42P60953 191 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 RPS23P62266 143 aaKnown RBP16.3■□□□□ 0.2
VPS33A-205ENST00000541169 GALK2Q01415 458 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 TEKQ02763 1124 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 PABPC1L2AQ5JQF8 200 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 SLC30A7Q8NEW0 376 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 OR2AJ1Q8NGZ0 328 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 TRUB1Q8WWH5 349 aaKnown RBP16.3■□□□□ 0.2
VPS33A-205ENST00000541169 C11orf40Q8WZ69 217 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 AKAP1Q92667 903 aaKnown RBP eCLIP16.3■□□□□ 0.2
VPS33A-205ENST00000541169 PIGTQ969N2 578 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 GRIP2Q9C0E4 1043 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 TVP23BQ9NYZ1 205 aa16.3■□□□□ 0.2
VPS33A-205ENST00000541169 CISD1Q9NZ45 108 aaKnown RBP16.3■□□□□ 0.2
VPS33A-205ENST00000541169 ABCA4P78363 2273 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 IGHV2OR16-5A0A0B4J2B6 119 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 SGCEO43556 437 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 RAF1P04049 648 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 BMP4P12644 408 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 ZNF35P13682 527 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 STOMP27105 288 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 PCSK6P29122 969 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 PSG4Q00888 419 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 ECH1Q13011 328 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 RAB39AQ14964 217 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 TEX30Q5JUR7 227 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 C12orf73Q69YU5 71 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 PAMR1Q6UXH9 720 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 PTP4A1Q93096 173 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 HRASLS5Q96KN8 279 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 DHRS9Q9BPW9 319 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 VCXQ9H320 206 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 RIBC2Q9H4K1 309 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 HEATR1Q9H583 2144 aaKnown RBP16.29■□□□□ 0.2
VPS33A-205ENST00000541169 CDH20Q9HBT6 801 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 H2AFY2Q9P0M6 372 aaPredicted RBP16.29■□□□□ 0.2
VPS33A-205ENST00000541169 ASH2LQ9UBL3 628 aa16.29■□□□□ 0.2
VPS33A-205ENST00000541169 GLCEO94923 617 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 TUBG1P23258 451 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 GDI2P50395 445 aaKnown RBP16.28■□□□□ 0.2
VPS33A-205ENST00000541169 TRIP10Q15642 601 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 TMEM236Q5W0B7 351 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 PLBD1Q6P4A8 553 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 RHOUQ7L0Q8 258 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 CXXC5Q7LFL8 322 aaKnown RBP16.28■□□□□ 0.2
VPS33A-205ENST00000541169 KBTBD8Q8NFY9 601 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 OR8J1Q8NGP2 316 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 OR9Q1Q8NGQ5 310 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 FGFBP3Q8TAT2 258 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 OTULINQ96BN8 352 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 HDHD2Q9H0R4 259 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 ZNF442Q9H7R0 627 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 EMC7Q9NPA0 242 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 TUBG2Q9NRH3 451 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 EIF3KQ9UBQ5 218 aaKnown RBP16.28■□□□□ 0.2
VPS33A-205ENST00000541169 CYB5R1Q9UHQ9 305 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 ST6GALNAC2Q9UJ37 374 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 ATP23Q9Y6H3 246 aa16.28■□□□□ 0.2
VPS33A-205ENST00000541169 CACNA1DQ01668 2161 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 DCHS2Q6V1P9 2916 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 ATP6V1G2-DDX39BF2Z307 99 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 ICMTO60725 284 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 TFP02787 698 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 PATE4P0C8F1 98 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 NR4A1P22736 598 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 DNASE1P24855 282 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 APOBEC3AP31941 199 aaPredicted RBP16.27■□□□□ 0.2
VPS33A-205ENST00000541169 RAD52P43351 418 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 HIST1H3AP68431 136 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 ADAM8P78325 824 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 EFNB1P98172 346 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 KEAP1Q14145 624 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 RAB35Q15286 201 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 PCK2Q16822 640 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 HIST2H3PS2Q5TEC6 136 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 LCN1P1Q5VSP4 162 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 AGAP6Q5VW22 663 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 NXNL2Q5VZ03 156 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 HIST2H3AQ71DI3 136 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 ZNF771Q7L3S4 317 aaPredicted RBP16.27■□□□□ 0.2
VPS33A-205ENST00000541169 SHFQ7M4L6 423 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 ZNF584Q8IVC4 421 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 CPOQ8IVL8 374 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 GID4Q8IVV7 300 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 OR6K6Q8NGW6 343 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 LILRB1Q8NHL6 650 aaPredicted RBP16.27■□□□□ 0.2
VPS33A-205ENST00000541169 TMEM163Q8TC26 289 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 COG8Q96MW5 612 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 DCLRE1CQ96SD1 692 aaKnown RBP16.27■□□□□ 0.2
VPS33A-205ENST00000541169 BCL2L14Q9BZR8 327 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 WNT5BQ9H1J7 359 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 MARCH7Q9H992 704 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 UBTD1Q9HAC8 227 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 NOX3Q9HBY0 568 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 IMPAD1Q9NX62 359 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 PLEK2Q9NYT0 353 aa16.27■□□□□ 0.2
VPS33A-205ENST00000541169 PRR14LQ5THK1 2151 aa16.27■□□□□ 0.19
VPS33A-205ENST00000541169 A0A1W2PPR1 153 aa16.26■□□□□ 0.19
VPS33A-205ENST00000541169 OR6C6A6NF89 314 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms