RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KMT5CQ86Y97 462 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 SIRT5Q9NXA8 310 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 MT-CO2P00403 227 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 C1QAP02745 245 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF728P0DKX0 622 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 CPT2P23786 658 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 CA13Q8N1Q1 262 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
CACNB1-206ENST00000539338 TRAPPC2LQ9UL33 140 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF346Q9UL40 294 aaKnown RBP13.26□□□□□ -0.29
CACNB1-206ENST00000539338 PLSCR5A0PG75 271 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 MSTNO14793 375 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 SHOXO15266 292 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 EIF4E2O60573 245 aaKnown RBP13.26□□□□□ -0.29
CACNB1-206ENST00000539338 LRP3O75074 770 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF780AO75290 641 aaPredicted RBP13.26□□□□□ -0.29
CACNB1-206ENST00000539338 PDGFAP04085 211 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 CSF3P09919 207 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 SP9P0CG40 484 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 COX6B1P14854 86 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 GABRA2P47869 451 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 P2RX1P51575 399 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF169Q14929 603 aaPredicted RBP13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ESCO2Q56NI9 601 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 SFRP5Q5T4F7 317 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 OGFOD3Q6PK18 319 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 CORO6Q6QEF8 472 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 PGAP1Q75T13 922 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 FAM71CQ8NEG0 241 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 PXT1Q8NFP0 134 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 OR11A1Q9GZK7 315 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 SLCO5A1Q9H2Y9 848 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 SLC25A19Q9HC21 320 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF223Q9UK11 482 aaPredicted RBP13.26□□□□□ -0.29
CACNB1-206ENST00000539338 COL24A1Q17RW2 1714 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 TTC3P53804 2025 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 SOD1P00441 154 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 C1QBP02746 253 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 CD22P20273 847 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ENPP1P22413 925 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 GPR3P46089 330 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 CYB561P49447 251 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 PLGLAQ15195 96 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 CTF1Q16619 201 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 IAH1Q2TAA2 248 aaPredicted RBP13.26□□□□□ -0.29
CACNB1-206ENST00000539338 ORAI1Q96D31 301 aa13.26□□□□□ -0.29
CACNB1-206ENST00000539338 TRAV17A0A0B4J275 112 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 KRBOX1C9JBD0 128 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 TXNL1O43396 289 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 DIO1P49895 249 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 RUNX2Q13950 521 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 ACKR1Q16570 336 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 FCRL6Q6DN72 434 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 RHOUQ7L0Q8 258 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 BATF2Q8N1L9 274 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 FAM213BQ8TBF2 198 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 CSF3RQ99062 836 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 RNF32Q9H0A6 362 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 GPATCH2Q9NW75 528 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 PIGLQ9Y2B2 252 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 PUS1Q9Y606 427 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNB1-206ENST00000539338 LOC107986453A0A1B0GWG9 222 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 CEACAM5P06731 702 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 EMDP50402 254 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 ZNF813Q6ZN06 617 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 MSRB3Q8IXL7 192 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 C16orf52Q8NHV5 167 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 TSLPQ969D9 159 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 SEMA4CQ9C0C4 833 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 TRIM64BA6NI03 449 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 ABHD16AO95870 558 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 SDHAP31040 664 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 CLINT1Q14677 625 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 BAK1Q16611 211 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 BTLAQ7Z6A9 289 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 RBPMSQ93062 196 aaKnown RBP13.25□□□□□ -0.29
CACNB1-206ENST00000539338 SLC25A21Q9BQT8 299 aaPredicted RBP13.25□□□□□ -0.29
CACNB1-206ENST00000539338 KCNE3Q9Y6H6 103 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 RPS10-NUDT3A0A1W2PQS6 291 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 OR6C6A6NF89 314 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 MPPED1O15442 326 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 EIF1P41567 113 aaKnown RBP13.25□□□□□ -0.29
CACNB1-206ENST00000539338 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
CACNB1-206ENST00000539338 TMUB2Q71RG4 321 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 MDGA2Q7Z553 956 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 PLA2G12AQ9BZM1 189 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 FBXO7Q9Y3I1 522 aa13.25□□□□□ -0.29
CACNB1-206ENST00000539338 A0A0A6YYJ9 748 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 SPAARA0A1B0GVQ0 90 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 A0A1W2PPV4 95 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 ARRDC5A6NEK1 342 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 NXPH3O95157 252 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 TRAPPC2P0DI81 140 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 TRAPPC2BP0DI82 140 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 CALCBP10092 127 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 EVX1P49640 407 aa13.24□□□□□ -0.29
CACNB1-206ENST00000539338 RPL18Q07020 188 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms