RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TRIML2Q8N7C3 387 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C15orf56Q8N910 161 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CYB561A3Q8NBI2 242 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MFSD9Q8NBP5 474 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 HSD17B11Q8NBQ5 300 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 APCDD1LQ8NCL9 501 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 BBOF1Q8ND07 529 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF680Q8NEM1 530 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 OR4D9Q8NGE8 314 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NUBPLQ8TB37 319 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TMA16Q96EY4 203 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ELMO2Q96JJ3 720 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SERAC1Q96JX3 654 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RNF157Q96PX1 679 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 FOXC2Q99958 501 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 DERL2Q9GZP9 239 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ISG20L2Q9H9L3 353 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LY9Q9HBG7 655 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 INPP5EQ9NRR6 644 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 AHSPQ9NZD4 102 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MAT2BQ9NZL9 334 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NUFIP1Q9UHK0 495 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 COPS3Q9UNS2 423 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RHBDD3Q9Y3P4 386 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TIMM10BQ9Y5J6 103 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NINLQ9Y2I6 1382 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 AKAP9Q99996 3911 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ADAMTS13Q76LX8 1427 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MYO5BQ9ULV0 1848 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LRP4O75096 1905 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 A0A0G2JN53 185 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SPRR5A0A1B0GTR4 108 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1B0GW54 56 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF487B1APH4 448 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RSPH10B2B2RC85 870 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TRDCB7Z8K6 153 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 E9PBE3 544 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LOC110117498-PIK3R3F6TDL0 507 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SIVA1O15304 175 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CRXO43186 299 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF208O43345 1280 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CST4P01036 141 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 APOA1P02647 267 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CD74P04233 296 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 GLAP06280 429 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RSPH10BP0C881 870 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 UBTFL6P0CB48 400 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF883P0CG24 379 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV3-43DP0DP04 118 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 F2RP25116 425 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 STOMP27105 288 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ACVR1BP36896 505 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CSKP41240 450 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RPL14P50914 215 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MAP3K7CLP57077 242 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TAS2R60P59551 318 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RPS15P62841 145 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CDK16Q00536 496 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PUDPQ08623 228 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PPIDQ08752 370 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 GNA13Q14344 377 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ABRAXAS2Q15018 415 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 KYAT1Q16773 422 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CARD16Q5EG05 197 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TCTEX1D4Q5JR98 221 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C8orf74Q6P047 294 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C1orf94Q6P1W5 598 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 Q6ZTC4 211 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 COX15Q7KZN9 410 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LINC00523Q86TU6 105 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 GTSCR1Q86UQ5 136 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 COMTD1Q86VU5 262 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 BBS5Q8N3I7 341 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 KIR3DL3Q8N743 410 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RHEBL1Q8TAI7 183 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MARCH1Q8TCQ1 289 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PSMG2Q969U7 264 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CMTM7Q96FZ5 175 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ARL5BQ96KC2 179 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 OR10C1Q96KK4 312 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 XPO6Q96QU8 1125 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SORT1Q99523 831 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SOSTQ9BQB4 213 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SPATA16Q9BXB7 569 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CHIAQ9BZP6 476 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 GBA3Q9H227 469 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RNF41Q9H4P4 317 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ASB8Q9H765 288 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CSNK1G1Q9HCP0 422 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LHX9Q9NQ69 397 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 STAP1Q9ULZ2 295 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 STARD10Q9Y365 291 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZC3H13Q5T200 1668 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MAP3K15Q6ZN16 1313 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SSH2Q76I76 1423 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ARID1AO14497 2285 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 DENND4BO75064 1496 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NOTCH3Q9UM47 2321 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C3P01024 1663 aa0.74□□□□□ -2.29
HIF1A-204ENST00000539097 MYOM1P52179 1685 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms