RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CSAG2Q9Y5P2 127 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 KNL1Q8NG31 2342 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 NUP214P35658 2090 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 DRGXA6NNA5 263 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 TSPAN6O43657 245 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 MTX2O75431 263 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 GJB3O75712 270 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 SERPINA5P05154 406 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 NPSP0C0P6 89 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 STEAP1BQ6NZ63 245 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 MEX3DQ86XN8 651 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 OR13D1Q8NGV5 346 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 MIB2Q96AX9 1013 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 OR2AG1Q9H205 316 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 ARRDC1-AS1Q9H2J1 176 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 SYNPO2LQ9H987 977 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 BRF2Q9HAW0 419 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 KLHL28Q9NXS3 571 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 A0A1B0GTI1 187 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 ANTXRLA6NF34 631 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 GAPDHSO14556 408 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 SOCS5O75159 536 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 LEFTY1O75610 366 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF432O94892 652 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 EDNRAP25101 427 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 SRSF4Q08170 494 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 TMEM220Q6QAJ8 160 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 CLDN19Q8N6F1 224 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF248Q8NDW4 579 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF649Q9BS31 505 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 PLA2G2FQ9BZM2 168 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 CHTOPQ9Y3Y2 248 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 C13orf42A0A1B0GVH6 325 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 XRCC3O43542 346 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 GLCEO94923 617 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 GLSO94925 669 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 DIRAS3O95661 229 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 PAX1P15863 534 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 NDUFV2P19404 249 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 THBS4P35443 961 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 PRKAG1P54619 331 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 TGM3Q08188 693 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 SRSF5Q13243 272 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 JOSD1Q15040 202 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 MST1LQ2TV78 715 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 C17orf47Q8NEP4 570 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 RRNAD1Q96FB5 475 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 TCEAL2Q9H3H9 227 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 HINT3Q9NQE9 182 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF223Q9UK11 482 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 MMP24Q9Y5R2 645 aa9.89□□□□□ -0.83
CLSTN3-207ENST00000537408 FAM183AA6NL82 134 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 HSBP1L1C9JCN9 74 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 OR1F1O43749 312 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 MRPL3P09001 348 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 PTHLHP12272 177 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SPEM2Q0P670 501 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 DMKNQ6E0U4 476 aaPredicted RBP9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 CD300LGQ6UXG3 332 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 Q6ZRG5 221 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 KCTD9Q7L273 389 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 ADAMTS17Q8TE56 1095 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 MR1Q95460 341 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC25A38Q96DW6 304 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 DTD2Q96FN9 168 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 WDR92Q96MX6 357 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SNHG12Q9BXW3 62 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 C1orf198Q9H425 327 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 DPEP2Q9H4A9 486 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 THAP10Q9P2Z0 257 aaPredicted RBP9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 P2RX2Q9UBL9 471 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SPACA6W5XKT8 324 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 CACNA1HO95180 2353 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 CPED1A4D0V7 1026 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 LDLRAD4O15165 306 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 P2RX6O15547 441 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 TCF21O43680 179 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SRMP19623 302 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 GABRR1P24046 479 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 AOAHP28039 575 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 PRSS3P35030 304 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 OR3A1P47881 315 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 PGFP49763 221 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 ST3GAL3Q11203 375 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 MEF2DQ14814 521 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 ZNF385BQ569K4 471 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 CLEC2AQ6UVW9 174 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC24A4Q8NFF2 622 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SEMA6DQ8NFY4 1073 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 FAM174AQ8TBP5 190 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 VWCEQ96DN2 955 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 OR14A2Q96R54 314 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 CHST6Q9GZX3 395 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 SCN1AP35498 2009 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 B4E171 279 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 KLKB1P03952 638 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 AMY2AP04746 511 aa9.88□□□□□ -0.83
CLSTN3-207ENST00000537408 MPLP40238 635 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms