RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CPEB3Q8NE35 698 aaKnown RBP9.77□□□□□ -0.84
CLIP1-209ENST00000537178 C14orf79Q96F83 325 aa9.77□□□□□ -0.84
CLIP1-209ENST00000537178 OR5M11Q96RB7 305 aa9.77□□□□□ -0.84
CLIP1-209ENST00000537178 CXorf36Q9H7Y0 433 aa9.77□□□□□ -0.84
CLIP1-209ENST00000537178 SNX11Q9Y5W9 270 aa9.77□□□□□ -0.84
CLIP1-209ENST00000537178 LGALS8O00214 317 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 EIF4E2O60573 245 aaKnown RBP9.77□□□□□ -0.85
CLIP1-209ENST00000537178 FUCA1P04066 466 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 OR13C7P0DN81 318 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 TEAD1P28347 426 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 DUSP1P28562 367 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 DOK3Q7L591 496 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 ARFGAP1Q8N6T3 406 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 OR52I1Q8NGK6 324 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 GOT1L1Q8NHS2 421 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-209ENST00000537178 C11orf40Q8WZ69 217 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 SLC7A6Q92536 515 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 URGCP-MRPS24S4R325 110 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 CHEK1O14757 476 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 CSO75390 466 aaKnown RBP9.77□□□□□ -0.85
CLIP1-209ENST00000537178 JTBO76095 146 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 YIF1AO95070 293 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 TPOP07202 933 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 SLC6A11P48066 632 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 CCR6P51684 374 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 EPHA5P54756 1037 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 MANEAQ5SRI9 462 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 C1orf140Q5VVS0 124 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 MAML2Q8IZL2 1156 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF687Q8N1G0 1237 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 PLPP7Q8NBV4 271 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 SEMA6DQ8NFY4 1073 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 OR5M8Q8NGP6 311 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 EDAQ92838 391 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 SUCNR1Q9BXA5 334 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 C1QTNF3Q9BXJ4 246 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 ZMAT3Q9HA38 289 aaKnown RBP9.77□□□□□ -0.85
CLIP1-209ENST00000537178 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
CLIP1-209ENST00000537178 MICAL3Q7RTP6 2002 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 TLCD2A6NGC4 264 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 GFRA2O00451 464 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 DOK2O60496 412 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 VAMP5O95183 116 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 ZDHHC11BP0C7U3 371 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 C9orf152Q5JTZ5 239 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 MFSD12Q6NUT3 480 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 SLC48A1Q6P1K1 146 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 TFAP2EQ6VUC0 442 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 GRINAQ7Z429 371 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 DCXRQ7Z4W1 244 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 TMEFF1Q8IYR6 380 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 OR51H1Q8NH63 302 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 ZNRF4Q8WWF5 429 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 SLC35A4Q96G79 324 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF251Q9BRH9 671 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 NDFIP1Q9BT67 221 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 RTL8AQ9BWD3 113 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 NMES1Q9C002 83 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 GLIPR2Q9H4G4 154 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 RNF150Q9ULK6 438 aa9.77□□□□□ -0.85
CLIP1-209ENST00000537178 MN1Q10571 1320 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TPRP12270 2363 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 ADAM12O43184 909 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 LGI1O95970 557 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 ELLP55199 621 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SEMA3BQ13214 749 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TOR2AQ5JU69 321 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 LINC00696Q6ZRV3 163 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TMUB2Q71RG4 321 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 ADGRG3Q86Y34 549 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 OR10Z1Q8NGY1 313 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 NIT2Q9NQR4 276 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 GAR1Q9NY12 217 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 YTHDF2Q9Y5A9 579 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 ZSWIM8A7E2V4 1837 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 RAF1P04049 648 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SELEP16581 610 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 EN2P19622 333 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 HOXD9P28356 352 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TRIM23P36406 574 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 KIR2DL3P43628 341 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SNRPGP62308 76 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TAGLNQ01995 201 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 LDLRAD1Q5T700 205 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM81Q6P7N7 255 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 CELF2-AS1Q8N7Q2 184 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 OR6C1Q96RD1 312 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SEMA6CQ9H3T2 930 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF586Q9NXT0 402 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 MTCH1Q9NZJ7 389 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 CHRNA9Q9UGM1 479 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 POLDIP2Q9Y2S7 368 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SLCO1B1Q9Y6L6 691 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 HMX2A2RU54 273 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 XKRY2A2RUG3 117 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 G3V3Y1 287 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 OR2F2O95006 317 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 CALCBP10092 127 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms