RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 KLHL24Q6TFL4 600 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 NHLRC1Q6VVB1 395 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 TMPPEQ6ZT21 453 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 FCRLAQ7L513 359 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 KRT74Q7RTS7 529 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 SYT9Q86SS6 491 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 TMPRSS12Q86WS5 348 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 TMEM105Q8N8V8 129 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 NOXO1Q8NFA2 376 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 RNF133Q8WVZ7 376 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 FCAMRQ8WWV6 532 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
SMG6-203ENST00000536871 TMEM41AQ96HV5 264 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 ZFP3Q96NJ6 502 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 AMELYQ99218 206 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 C1orf198Q9H425 327 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
SMG6-203ENST00000536871 SH2D2AQ9NP31 389 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 HPF1Q9NWY4 346 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 B3GAT1Q9P2W7 334 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 MRPS7Q9Y2R9 242 aaKnown RBP12.14□□□□□ -0.47
SMG6-203ENST00000536871 PI4KAP42356 2102 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 ZNF726A6NNF4 738 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 AGRPO00253 132 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 EFNA2O43921 213 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 CBR3O75828 277 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 KRT33AO76009 404 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 H2BFMP0C1H6 154 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 IL11P20809 199 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
SMG6-203ENST00000536871 MADCAM1Q13477 382 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 SSPNQ14714 243 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 SLC36A2Q495M3 483 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 C6orf15Q6UXA7 325 aaPredicted RBP12.13□□□□□ -0.47
SMG6-203ENST00000536871 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 ASB18Q6ZVZ8 466 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 LIX1LQ8IVB5 337 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 ELMOD2Q8IZ81 293 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 UBE2J2Q8N2K1 259 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 NKAIN3Q8N8D7 197 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 SYNPRQ8TBG9 265 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 ST7LQ8TDW4 575 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 RNF31Q96EP0 1072 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 DNAJA3Q96EY1 480 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 ST6GAL2Q96JF0 529 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 OR5B2Q96R09 309 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 TAAR9Q96RI9 348 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 NAA11Q9BSU3 229 aaPredicted RBP12.13□□□□□ -0.47
SMG6-203ENST00000536871 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 OR5V1Q9UGF6 321 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 FBXL2Q9UKC9 423 aa12.13□□□□□ -0.47
SMG6-203ENST00000536871 SULT2B1O00204 365 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 SLC17A2O00624 439 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 SRSF10O75494 262 aaKnown RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 STK17BO94768 372 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 GPANK1O95872 356 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 HPP00738 406 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 SP9P0CG40 484 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 CD37P11049 281 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 ARSBP15848 533 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 CTRB1P17538 263 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 GALK2Q01415 458 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 EIF3IQ13347 325 aaKnown RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 SNTB2Q13425 540 aaKnown RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 POU4F3Q15319 338 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 ETFDHQ16134 617 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 KCNMB1Q16558 191 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 OR7E24Q6IFN5 339 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 LINGO2Q7L985 606 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 DCXRQ7Z4W1 244 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 KDM8Q8N371 416 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 FAM109AQ8N4B1 249 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 OR1J4Q8NGS1 313 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 AKAP1Q92667 903 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMG6-203ENST00000536871 UPRTQ96BW1 309 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 SLC25A38Q96DW6 304 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 AIFM2Q9BRQ8 373 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 CDCP1Q9H5V8 836 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 DDX28Q9NUL7 540 aaKnown RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 MED29Q9NX70 200 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 ANKRD10Q9NXR5 420 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 OR52A1Q9UKL2 312 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 NUP50Q9UKX7 468 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 LOXL2Q9Y4K0 774 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 ALG5Q9Y673 324 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 CPAMD8Q8IZJ3 1885 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 PGA4P0DJD7 388 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 PGA3P0DJD8 388 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 LIFP15018 202 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 ADRA2CP18825 462 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 RPS27P42677 84 aaKnown RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 P2RY4P51582 365 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 NKX2-5P52952 324 aaPredicted RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 SSBP1Q04837 148 aaKnown RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 RAB11BQ15907 218 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms