RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375		Q9UF83	564 aa		3.02	□□□□□ -1.93
PICALM-222	ENST00000534375	APOBEC3B	Q9UH17	382 aa	Known RBP	3.02	□□□□□ -1.93
PICALM-222	ENST00000534375		A0A1B0GVI7	797 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375		A0A1W2PRF3	423 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375		A0A1W2PRM7	423 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	NDUFAF8	A1L188	74 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	TRPC5OS	A6NMA1	111 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	NME4	O00746	187 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	TNFSF11	O14788	317 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	RAD51C	O43502	376 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	TBL1X	O60907	577 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	E2F6	O75461	281 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	SMC2	O95347	1197 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	CST4	P01036	141 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	IGHV3-23	P01764	117 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	IGHV3-13	P01766	116 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	HOXC4	P09017	264 aa	Predicted RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	PRPS2	P11908	318 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	ZP3	P21754	424 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	BGN	P21810	368 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	GDF1	P27539	372 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	UGT2B15	P54855	530 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	CLDN6	P56747	220 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	MAP3K7CL	P57077	242 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	NUTF2	P61970	127 aa	Known RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	FZD2	Q14332	565 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	KIAA0087	Q14695	138 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	OR7A5	Q15622	319 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	USF2	Q15853	346 aa	Predicted RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	TIMM50	Q3ZCQ8	353 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	TMPRSS11A	Q6ZMR5	421 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	TMEM150A	Q86TG1	271 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	VKORC1L1	Q8N0U8	176 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	OR2AP1	Q8NGE2	309 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	ITFG1	Q8TB96	612 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	CCDC12	Q8WUD4	166 aa	Predicted RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	PIK3IP1	Q96FE7	263 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	FCRL1	Q96LA6	429 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	SOST	Q9BQB4	213 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	UTP23	Q9BRU9	249 aa	Known RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	PANK3	Q9H999	370 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	DMAP1	Q9NPF5	467 aa	Predicted RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	MCUB	Q9NWR8	336 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	NXT1	Q9UKK6	140 aa	Known RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	SCML1	Q9UN30	329 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	TET2	Q6N021	2002 aa	Predicted RBP	3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	CACNA1F	O60840	1977 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	CAMTA1	Q9Y6Y1	1673 aa		3.01	□□□□□ -1.93
PICALM-222	ENST00000534375	MGAT4D	A6NG13	374 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	PRSS44	E7EML9	344 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	SCN2B	O60939	215 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	CDK14	O94921	469 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	LCA5L	O95447	670 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	TIMP1	P01033	207 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	GIG44	P09565	113 aa	Predicted RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	CAPN2	P17655	700 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	CMA1	P23946	247 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	DEK	P35659	375 aa	Known RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	SERPINB5	P36952	375 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	OR3A4P	P47883	348 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	FGF8	P55075	233 aa	Predicted RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	OR2B6	P58173	313 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	PMS2P3	Q13401	168 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	COTL1	Q14019	142 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	ZBED5	Q49AG3	693 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	PRR30	Q53SZ7	412 aa	Predicted RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	LCN12	Q6JVE5	192 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	ZNF497	Q6ZNH5	498 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	TMEM135	Q86UB9	458 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	ABCA7	Q8IZY2	2146 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	CADM2	Q8N3J6	435 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	MREG	Q8N565	214 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	KLHL30-AS1	Q8NEE0	82 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	OR2A1	Q8NGT9	310 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	FANK1	Q8TC84	345 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	LGALS14	Q8TCE9	139 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	SDR42E1	Q8WUS8	393 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	CENPN	Q96H22	339 aa	Predicted RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	FOXN4	Q96NZ1	517 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	CYTH2	Q99418	400 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	NAPG	Q99747	312 aa	Predicted RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	ARHGDIG	Q99819	225 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	VGLL1	Q99990	258 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	APOL2	Q9BQE5	337 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	UQCC2	Q9BRT2	126 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	TRIM15	Q9C019	465 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	RPF2	Q9H7B2	306 aa	Known RBP	3	□□□□□ -1.93
PICALM-222	ENST00000534375	ZNF702P	Q9H963	129 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	TMEM9B	Q9NQ34	198 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	OR2S2	Q9NQN1	319 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	NECAP2	Q9NVZ3	263 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	UBAP1	Q9NZ09	502 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375	VSIG4	Q9Y279	399 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375		V9GYY9	64 aa		3	□□□□□ -1.93
PICALM-222	ENST00000534375		A0A087WWV3	80 aa		2.99	□□□□□ -1.93
PICALM-222	ENST00000534375	IGLV1-36	A0A0B4J1U3	117 aa		2.99	□□□□□ -1.93
PICALM-222	ENST00000534375	TVP23A	A6NH52	213 aa		2.99	□□□□□ -1.93
PICALM-222	ENST00000534375	KRTAP16-1	A8MUX0	517 aa		2.99	□□□□□ -1.93
PICALM-222	ENST00000534375	HIDE1	A8MVS5	230 aa		2.99	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms