RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 OR2AT4A6NND4 320 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 SCGB2A1O75556 95 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 NCR1O76036 304 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ACTBP60709 375 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ACTG1P63261 375 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 PPA1Q15181 289 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ZFP69Q49AA0 526 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 BAIAP2L2Q6UXY1 529 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 RBMS3Q6XE24 437 aaKnown RBP7.18□□□□□ -1.26
CTNND1-230ENST00000532245 TTTY12Q9BZ98 90 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 RNF32Q9H0A6 362 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 FAM234AQ9H0X4 552 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ZNF355PQ9NSJ1 428 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 ZNF221Q9UK13 617 aa7.18□□□□□ -1.26
CTNND1-230ENST00000532245 BTBD17A6NE02 478 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 GABRPO00591 440 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 UBL3O95164 117 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 TIAF1O95411 115 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 RAB40ALP0C0E4 278 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 SNTB2Q13425 540 aaKnown RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 RAB35Q15286 201 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZNF74Q16587 644 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZBTB8BQ8NAP8 495 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZC3H10Q96K80 434 aaKnown RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 OR14A2Q96R54 314 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 SYT3Q9BQG1 590 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 TMEM59Q9BXS4 323 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 MAN2C1Q9NTJ4 1040 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 H7C2Y5 167 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 CDC14BO60729 498 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 TBX19O60806 448 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 PRKACAP17612 351 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZNF93P35789 620 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 BMXP51813 675 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 PSG6Q00889 435 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 DMRTC1Q5HYR2 192 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 KHDC1LQ5JSQ8 128 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 MRM1Q6IN84 353 aaKnown RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 TMEM108Q6UXF1 575 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 FAM185AQ8N0U4 392 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 PLPP7Q8NBV4 271 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 REEP6Q96HR9 211 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 VSTM2LQ96N03 204 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 HINT3Q9NQE9 182 aaKnown RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ACOXLQ9NUZ1 547 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 NUDT15Q9NV35 164 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 TBCCD1Q9NVR7 557 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 STEAP1Q9UHE8 339 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ARID2Q68CP9 1835 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 MAGEB4O15481 346 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 GPRIN2O60269 458 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ATG12O94817 140 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 SERPINE2P07093 398 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 FAM87AP0C7U9 286 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 GLRA1P23415 457 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 PSMA6P60900 246 aaKnown RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 EMX1Q04741 257 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 LTBQ06643 244 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 CD226Q15762 336 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 Q499Y3 187 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 C1orf87Q8N0U7 546 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 SPARTQ8N0X7 666 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZNF709Q8N972 641 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 OR52I1Q8NGK6 324 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 CMC2Q9NRP2 79 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 SEC16AO15027 2179 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 BHLHE40O14503 412 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 IGLV3-19P01714 112 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 YES1P07947 543 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 GNMTQ14749 295 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZMYND11Q15326 602 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 SHBQ15464 509 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ESCO2Q56NI9 601 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 MEX3BQ6ZN04 569 aaKnown RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 COMTD1Q86VU5 262 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 TUSC5Q8IXB3 177 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZNF420Q8TAQ5 688 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-230ENST00000532245 NDNFQ8TB73 568 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 ZNF696Q9H7X3 374 aa7.17□□□□□ -1.26
CTNND1-230ENST00000532245 A0A0B4J2E0 115 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 A0A1B0GX12 115 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 OR6C6A6NF89 314 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 DEGS1O15121 323 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 ACTL6AO96019 429 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 C1QAP02745 245 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 HTR2CP28335 458 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 CD40LGP29965 261 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 BLVRBP30043 206 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-230ENST00000532245 CAV3P56539 151 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 LIPNQ5VXI9 398 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 PAQR6Q6TCH4 344 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 DOK3Q7L591 496 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 PDCD1LG2Q9BQ51 273 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 ABCG5Q9H222 651 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 PRMT8Q9NR22 394 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-230ENST00000532245 GDF2Q9UK05 429 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-230ENST00000532245 CDX4O14627 284 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-230ENST00000532245 LINC00271P0C7V0 271 aa7.16□□□□□ -1.26
CTNND1-230ENST00000532245 HLA-DMAP28067 261 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms