RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ETV2O00321 342 aaPredicted RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 GPR171O14626 319 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 TFECO14948 347 aaPredicted RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 CTDSPLO15194 276 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 MAGEB4O15481 346 aaPredicted RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 PLA2G10O15496 165 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 SULT1B1O43704 296 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 SLC43A1O75387 559 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 UPK3AO75631 287 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 AKR7A3O95154 331 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 ZFPL1O95159 310 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 PLGP00747 810 aaPredicted RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 SPARCP09486 303 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 PSKH1P11801 424 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 NR2C1P13056 603 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 DDOSTP39656 456 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 MMP15P51511 669 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 RIDAP52758 137 aaKnown RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 PER3P56645 1201 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 AP3S2P59780 193 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 RPS11P62280 158 aaKnown RBP eCLIP10.52□□□□□ -0.73
USF1-208ENST00000528768 LCN6P62502 163 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 MRPS10P82664 201 aaKnown RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 SELENBP1Q13228 472 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 MRPL49Q13405 166 aaKnown RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 P2RY14Q15391 338 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 OR7A5Q15622 319 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 NTRK2Q16620 822 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 BTBD16Q32M84 506 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 SLC25A35Q3KQZ1 300 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 JMJD6Q6NYC1 403 aaPredicted RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 SPATC1Q76KD6 591 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 DPY19L4Q7Z388 723 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 ZNF679Q8IYX0 411 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 ZNF433Q8N7K0 673 aaPredicted RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 OR10H5Q8NGA6 315 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 OR4M2Q8NGB6 313 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 OR13C5Q8NGS8 318 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 OR2G2Q8NGZ5 317 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 M1APQ8TC57 530 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 PNPLA2Q96AD5 504 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 SPACA9Q96E40 222 aaPredicted RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 S100A16Q96FQ6 103 aaKnown RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 NEDD4LQ96PU5 975 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 RBP7Q96R05 134 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 PDCD1LG2Q9BQ51 273 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 PPIL3Q9H2H8 161 aaKnown RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 MED11Q9P086 117 aa10.52□□□□□ -0.73
USF1-208ENST00000528768 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
USF1-208ENST00000528768 HEATR5AQ86XA9 2040 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 HIVEP1P15822 2718 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 MTORP42345 2549 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 A0A1W2PPK0 400 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ANXA2P2A6NMY6 339 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 FTCDNL1E5RQL4 147 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 DVL2O14641 736 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 GSTZ1O43708 216 aaPredicted RBP10.51□□□□□ -0.73
USF1-208ENST00000528768 OR2J2O76002 312 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ABHD16AO95870 558 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ECDO95905 644 aaPredicted RBP10.51□□□□□ -0.73
USF1-208ENST00000528768 DHFRP00374 187 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 CD2P06729 351 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ANXA2P07355 339 aaKnown RBP10.51□□□□□ -0.73
USF1-208ENST00000528768 ATF1P18846 271 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ADH6P28332 368 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 FOLR3P41439 243 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 KIR2DL3P43628 341 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 BTG1P62324 171 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ADAM8P78325 824 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ROM1Q03395 351 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 FOXF1Q12946 379 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 SLC17A1Q14916 467 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 CEP78Q5JTW2 689 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 C3orf33Q6P1S2 294 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 DEGS2Q6QHC5 323 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 SLC35D2Q76EJ3 337 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 CDH24Q86UP0 819 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 NR2C2APQ86WQ0 139 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ZNF227Q86WZ6 799 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 TOMM5Q8N4H5 51 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ELP5Q8TE02 316 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 RNF128Q8TEB7 428 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ASB10Q8WXI3 467 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 CREB3L1Q96BA8 519 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ZBTB8AQ96BR9 441 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ZNF524Q96C55 264 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 GPR87Q9BY21 358 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 OR11A1Q9GZK7 315 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ZNF700Q9H0M5 742 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 MMP28Q9H239 520 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 DPAGT1Q9H3H5 408 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ELOVL3Q9HB03 270 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 APMAPQ9HDC9 416 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 SACM1LQ9NTJ5 587 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 DDX28Q9NUL7 540 aaKnown RBP10.51□□□□□ -0.73
USF1-208ENST00000528768 CKLFQ9UBR5 152 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 PADI1Q9ULC6 663 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 PTRH2Q9Y3E5 179 aaKnown RBP10.51□□□□□ -0.73
USF1-208ENST00000528768 CACNG2Q9Y698 323 aa10.51□□□□□ -0.73
USF1-208ENST00000528768 ZFHX3Q15911 3703 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms