RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 HSD17B14Q9BPX1 270 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 DRC3Q9H069 523 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 C1orf198Q9H425 327 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 NYAP2Q9P242 653 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 TP53BP1Q12888 1972 aaPredicted RBP4.58□□□□□ -1.68
PCF11-202ENST00000528336 LAMB1P07942 1786 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 THSD7BQ9C0I4 1608 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 CCL15-CCL14A0A0B4J2E2 113 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 A0A1B0GTI1 187 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 A0A1B0GUS0 222 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 BCLAF3A2AJT9 711 aaKnown RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 IGLON5A6NGN9 336 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 F8VP50 259 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 SIRPB1O00241 398 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 NDUFAB1O14561 156 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ENTPD5O75356 428 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 HLA-HP01893 362 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 KRT7P08729 469 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 NR2C1P13056 603 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 FOLR2P14207 255 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 PMCHP20382 165 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 LMO2P25791 158 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 PCK1P35558 622 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 AQP2P41181 271 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ACTR1BP42025 376 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 MAGOHP61326 146 aaKnown RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 TRAM2Q15035 370 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 UAP1Q16222 522 aaPredicted RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 CCL15Q16663 113 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 HAGHQ16775 308 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 EXOC3L4Q17RC7 722 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 QRICH1Q2TAL8 776 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 SLC25A52Q3SY17 297 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 HIGD2BQ4VC39 106 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 TTC33Q6PID6 262 aaPredicted RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 Q6ZRG5 221 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 UTS2BQ765I0 119 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ZNF546Q86UE3 836 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ERICH1Q86X53 443 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 HPS6Q86YV9 775 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 JAGN1Q8N5M9 183 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 OR2L8Q8NGY9 312 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 C8orf46Q8TAG6 207 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ACER1Q8TDN7 264 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 TIMD4Q96H15 378 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 SERPINB11Q96P15 392 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 XPO6Q96QU8 1125 aaKnown RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 PSMB7Q99436 277 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 CNN2Q99439 309 aaKnown RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 ECSITQ9BQ95 431 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 NIPSNAP3BQ9BS92 247 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 COMMD4Q9H0A8 199 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 SLITRK2Q9H156 845 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 IKZF5Q9H5V7 419 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ALG9Q9H6U8 611 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 KIR3DX1Q9H7L2 352 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 POPDC2Q9HBU9 364 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 NANSQ9NR45 359 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ABCD2Q9UBJ2 740 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 ZNF282Q9UDV7 671 aaPredicted RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 PURGQ9UJV8 347 aaKnown RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 NUP50Q9UKX7 468 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 TIMM22Q9Y584 194 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 TSSC4Q9Y5U2 329 aaPredicted RBP4.57□□□□□ -1.68
PCF11-202ENST00000528336 DOCK1Q14185 1865 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 LAMA4Q16363 1823 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 PCNTO95613 3336 aa4.57□□□□□ -1.68
PCF11-202ENST00000528336 GON4LQ3T8J9 2241 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 TRBV5-4A0A0C4DH59 114 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 OR5H15A6NDH6 313 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 FAM74A7A6NL05 159 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 G3V4G9 280 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 SMLR1H3BR10 107 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 PHF1O43189 567 aaPredicted RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 LRATO95237 230 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 FARS2O95363 451 aaKnown RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 TSPAN13O95857 204 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 P04436 131 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 GSTA1P08263 222 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 CD3GP09693 182 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 H2AFXP16104 143 aaPredicted RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 XRCC1P18887 633 aaPredicted RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 GABRR2P28476 465 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 GSK3BP49841 420 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 RPS6P62753 249 aaKnown RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 PAX2Q02962 417 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 GLO1Q04760 184 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 ORC2Q13416 577 aaPredicted RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 SGCAQ16586 387 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 C5orf64Q2M2E5 130 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 SLC22A6Q4U2R8 563 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 TP53I3Q53FA7 332 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 PAN3Q58A45 887 aaKnown RBP4.56□□□□□ -1.68
PCF11-202ENST00000528336 MUC21Q5SSG8 566 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 FAM182AQ5T1J6 154 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 C9orf66Q5T8R8 295 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 REEP3Q6NUK4 255 aa4.56□□□□□ -1.68
PCF11-202ENST00000528336 PRMT9Q6P2P2 845 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms