RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZDHHC21Q8IVQ6 265 aa28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 EIF3KQ9UBQ5 218 aaKnown RBP28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 IGHV4-61A0A0C4DH41 118 aa28.31■■■□□ 2.12
SSSCA1-205ENST00000527920 C5orf49A4QMS7 147 aa28.31■■■□□ 2.12
SSSCA1-205ENST00000527920 ZNF23P17027 643 aa28.31■■■□□ 2.12
SSSCA1-205ENST00000527920 RIN1Q13671 783 aa28.31■■■□□ 2.12
SSSCA1-205ENST00000527920 TMEM160Q9NX00 188 aa28.31■■■□□ 2.12
SSSCA1-205ENST00000527920 TMCC3Q9ULS5 477 aa28.31■■■□□ 2.12
SSSCA1-205ENST00000527920 IER3IP1Q9Y5U9 82 aa28.31■■■□□ 2.12
SSSCA1-205ENST00000527920 IMPA2O14732 288 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 KRT36O76013 467 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 COX5BP10606 129 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 RRM2P31350 389 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 WNT5AP41221 380 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 ERVS71-1P61550 626 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 MRPS11P82912 194 aaKnown RBP28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 MOGQ16653 247 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 NKPD1Q17RQ9 610 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 HIPK1Q86Z02 1210 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 FANK1Q8TC84 345 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 POP5Q969H6 163 aaKnown RBP28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 SYT4Q9H2B2 425 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 OR51B6Q9H340 312 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 TAAR3PQ9P1P4 343 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 IL20RAQ9UHF4 553 aa28.3■■■□□ 2.12
SSSCA1-205ENST00000527920 ANK3Q12955 4377 aaKnown RBP28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 ARPC3O15145 178 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 OR10H3O60404 316 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 KHDRBS3O75525 346 aaKnown RBP28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 CLPTM1O96005 669 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 SCG5P05408 212 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 TACSTD2P09758 323 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 ATP6V1B2P21281 511 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 CCNOP22674 350 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 MAGEA2P43356 314 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 HMGA2P52926 109 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 SCRN3Q0VDG4 424 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 RFX4Q33E94 735 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 PRIMA1Q86XR5 153 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 ZNF101Q8IZC7 436 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 OR1J1Q8NGS3 322 aa28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 NDRG4Q9ULP0 352 aaKnown RBP28.29■■■□□ 2.12
SSSCA1-205ENST00000527920 YLPM1P49750 1951 aaKnown RBP28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 H3BSA7 217 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 SLC16A7O60669 478 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 IGHV3-13P01766 116 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 SLC6A6P31641 620 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 GSSP48637 474 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 ELFN2Q5R3F8 820 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 LCN8Q6JVE9 175 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 ZNF774Q6NX45 483 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 C1orf94Q6P1W5 598 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 CYP2R1Q6VVX0 501 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 GLB1L2Q8IW92 636 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 SNX33Q8WV41 574 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 SNX18Q96RF0 628 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 OR52D1Q9H346 318 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 HINT3Q9NQE9 182 aaKnown RBP28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 NKIRAS2Q9NYR9 191 aa28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 PRPF19Q9UMS4 504 aaKnown RBP28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 CHD3Q12873 2000 aaKnown RBP28.28■■■□□ 2.12
SSSCA1-205ENST00000527920 SOCS2O14508 198 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 LSM6P62312 80 aaKnown RBP28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 PCGF3Q3KNV8 242 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 UGT2A3Q6UWM9 527 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 PTCHD4Q6ZW05 846 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 RDH5Q92781 318 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 MAGIXQ9H6Y5 334 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 CHODLQ9H9P2 273 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 EMC7Q9NPA0 242 aa28.27■■■□□ 2.12
SSSCA1-205ENST00000527920 C17orf100A8MU93 164 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 T-ENOLP0DO92 83 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 NAT2P11245 290 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 AQP6Q13520 282 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 TRIM25Q14258 630 aaKnown RBP28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 ZNF718Q3SXZ3 478 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 ARL9Q6T311 187 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 LINC00471Q8N535 108 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 HPS1Q92902 700 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 MARS2Q96GW9 593 aaKnown RBP28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 NUAK2Q9H093 628 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 FAM53CQ9NYF3 392 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 LYVE1Q9Y5Y7 322 aa28.26■■■□□ 2.11
SSSCA1-205ENST00000527920 TCRBV5S2A0A599 114 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 HPXP02790 462 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 MT-ND5P03915 603 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 ACHEP22303 614 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 CRABP1P29762 137 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 CDKN2AP42771 156 aaKnown RBP28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 CHN2P52757 468 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 TSPAN31Q12999 210 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 KCNMB1Q16558 191 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 MBNL2Q5VZF2 373 aaKnown RBP28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 DNM1P34Q6PK57 102 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 DHFR2Q86XF0 187 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 ICA1LQ8NDH6 482 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 GNPDA2Q8TDQ7 276 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 ERMAPQ96PL5 475 aaPredicted RBP28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 TRIM15Q9C019 465 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 C1orf21Q9H246 121 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms