RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 A6NHS1 94 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 OR6C65A6NJZ3 312 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 E9PI62 339 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 PSMD9O00233 223 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 ATXN7O15265 892 aaPredicted RBP12.64□□□□□ -0.39
COLCA2-202ENST00000526216 LRRTM2O43300 516 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 OR8G3PP0DMU2 310 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF823P16415 610 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 MSR1P21757 451 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 PSMB9P28065 219 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 RBPJQ06330 500 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 EIF2B1Q14232 305 aaKnown RBP12.64□□□□□ -0.39
COLCA2-202ENST00000526216 SPHARQ15513 63 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 MED22Q15528 200 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 KLHL24Q6TFL4 600 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 CFAP77Q6ZQR2 320 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 FGFBP3Q8TAT2 258 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 FCGR1BQ92637 280 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 RORBQ92753 470 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 C4orf36Q96KX1 117 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 COG8Q96MW5 612 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 MNTQ99583 582 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 CHCHD3Q9NX63 227 aaKnown RBP12.64□□□□□ -0.39
COLCA2-202ENST00000526216 SLCO1C1Q9NYB5 712 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF224Q9NZL3 707 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 LAMP5Q9UJQ1 280 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 SIRT4Q9Y6E7 314 aaPredicted RBP12.64□□□□□ -0.39
COLCA2-202ENST00000526216 SVILO95425 2214 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 KMT2BQ9UMN6 2715 aaPredicted RBP12.64□□□□□ -0.39
COLCA2-202ENST00000526216 FREM1Q5H8C1 2179 aa12.64□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF587BE7ETH6 402 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 J3QLW9 94 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 KRT33AO76009 404 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 IL18BPO95998 194 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 CRHP06850 196 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF19P17023 458 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 LIPAP38571 399 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 LSM6P62312 80 aaKnown RBP12.63□□□□□ -0.39
COLCA2-202ENST00000526216 HIST1H3AP68431 136 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 SSX1Q16384 188 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 TIGD6Q17RP2 521 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 ARMCX4Q5H9R4 360 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 HIST2H3PS2Q5TEC6 136 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 FAM27BQ5VT28 67 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 FOXB2Q5VYV0 432 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 PLEKHG7Q6ZR37 379 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 HIST2H3AQ71DI3 136 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF627Q7L945 461 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 ATCAYQ86WG3 371 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 KLBQ86Z14 1044 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 UBE2J2Q8N2K1 259 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 ZFP41Q8N8Y5 198 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 OR52N5Q8NH56 324 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 YIPF6Q96EC8 236 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 FBXO17Q96EF6 278 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 BBC3Q96PG8 261 aaPredicted RBP12.63□□□□□ -0.39
COLCA2-202ENST00000526216 OR8B4Q96RC9 309 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 DMRTA2Q96SC8 542 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 MGLLQ99685 303 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 SH3GL3Q99963 347 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
COLCA2-202ENST00000526216 OPN3Q9H1Y3 402 aaPredicted RBP12.63□□□□□ -0.39
COLCA2-202ENST00000526216 SIAEQ9HAT2 523 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 VCX3AQ9NNX9 186 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 PNRC2Q9NPJ4 139 aaKnown RBP12.63□□□□□ -0.39
COLCA2-202ENST00000526216 PLSCR4Q9NRQ2 329 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 ACOXLQ9NUZ1 547 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 ASH2LQ9UBL3 628 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 GDF2Q9UK05 429 aaPredicted RBP12.63□□□□□ -0.39
COLCA2-202ENST00000526216 GRIP1Q9Y3R0 1128 aa12.63□□□□□ -0.39
COLCA2-202ENST00000526216 PHF3Q92576 2039 aaKnown RBP12.63□□□□□ -0.39
COLCA2-202ENST00000526216 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF503-AS2A6NEH8 195 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 IL2RAP01589 272 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 PATE4P0C8F1 98 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 GTF2A1P52655 376 aaPredicted RBP12.62□□□□□ -0.39
COLCA2-202ENST00000526216 PER3P56645 1201 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 PMPCAQ10713 525 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 TSTQ16762 297 aaKnown RBP12.62□□□□□ -0.39
COLCA2-202ENST00000526216 LRRN1Q6UXK5 716 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF813Q6ZN06 617 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 SPATC1Q76KD6 591 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 VASH1Q7L8A9 365 aaPredicted RBP12.62□□□□□ -0.39
COLCA2-202ENST00000526216 SKA3Q8IX90 412 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 SYS1Q8N2H4 156 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 LRRC18Q8N456 261 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 ZNF610Q8N9Z0 462 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 PELI1Q96FA3 418 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 NAA50Q9GZZ1 169 aaKnown RBP12.62□□□□□ -0.39
COLCA2-202ENST00000526216 Q9UFV3 132 aa12.62□□□□□ -0.39
COLCA2-202ENST00000526216 TMEM14AQ9Y6G1 99 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms