RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 PSMD11O00231 422 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 NVLO15381 856 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 NUPL2O15504 423 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 FKBP6O75344 327 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 SRSF10O75494 262 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 CSF3P09919 207 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 GABRR2P28476 465 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 RFC3P40938 356 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 PSMD4P55036 377 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 NUTF2P61970 127 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 SEMG2Q02383 582 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 MECOMQ03112 1051 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 ZNF33AQ06730 810 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 DMTNQ08495 405 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 TWF1Q12792 350 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 ARFRP1Q13795 201 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 RCAN2Q14206 197 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 STK38Q15208 465 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 NSDHLQ15738 373 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 PSMD5Q16401 504 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 GABRA6Q16445 453 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 SGCAQ16586 387 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 CCDC14Q49A88 953 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 HSP90AA4PQ58FG1 418 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 UBE2UQ5VVX9 321 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 LCN12Q6JVE5 192 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 CD177Q8N6Q3 437 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 DRAXINQ8NBI3 349 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 TMEM104Q8NE00 496 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 OR4F15Q8NGB8 312 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 OR51F2Q8NH61 342 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 LILRB4Q8NHJ6 448 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 NDRG1Q92597 394 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 UCN3Q969E3 161 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 ISOC2Q96AB3 205 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 APH1AQ96BI3 265 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 C16orf74Q96GX8 76 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 MSANTD3Q96H12 275 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 ZBED3Q96IU2 234 aaPredicted RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 DNAJC1Q96KC8 554 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 TSSK3Q96PN8 268 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 CHID1Q9BWS9 393 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 PATZ1Q9HBE1 687 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 EML4Q9HC35 981 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 ZC4H2Q9NQZ6 224 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 MTRF1LQ9UGC7 380 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 F11RQ9Y624 299 aaKnown RBP3.21□□□□□ -1.9
CSDE1-211ENST00000525970 KPTNQ9Y664 436 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 TNRQ92752 1358 aa3.21□□□□□ -1.9
CSDE1-211ENST00000525970 CAMTA1Q9Y6Y1 1673 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 A6NDN8 102 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 NCBP2LA6PVI3 153 aaKnown RBP3.2□□□□□ -1.9
CSDE1-211ENST00000525970 PHOX2AO14813 284 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 XRCC2O43543 280 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 MMP23AO75900 390 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 SUPT7LO94864 414 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 LSM8O95777 96 aaKnown RBP3.2□□□□□ -1.9
CSDE1-211ENST00000525970 KLK1P06870 262 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 KRT16P08779 473 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 RAB4AP20338 218 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 PMCHP20382 165 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 CSKP41240 450 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 RND2P52198 227 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 PRPS1P60891 318 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 ATP6V0D1P61421 351 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 IGLV3-21P80748 117 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-211ENST00000525970 REG3AQ06141 175 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 TSC22D1Q15714 1073 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 NPSR1Q6W5P4 371 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 Q6ZR54 194 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 SLC35D2Q76EJ3 337 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 TRAM1L1Q8N609 369 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 NPBQ8NG41 125 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 ITFG1Q8TB96 612 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 ZNF596Q8TC21 504 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 FANK1Q8TC84 345 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 CACNG8Q8WXS5 425 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 AURKBQ96GD4 344 aaPredicted RBP3.2□□□□□ -1.9
CSDE1-211ENST00000525970 TMEM101Q96IK0 257 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 FOXC2Q99958 501 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 TM6SF2Q9BZW4 377 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 KCNE3Q9Y6H6 103 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 PLEKHG1Q9ULL1 1385 aa3.2□□□□□ -1.9
CSDE1-211ENST00000525970 ABCA7Q8IZY2 2146 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 IGLV1-36A0A0B4J1U3 117 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 HIDE1A8MVS5 230 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 PEX7O00628 323 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 TNFSF11O14788 317 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 YKT6O15498 198 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 RRP8O43159 456 aaKnown RBP3.19□□□□□ -1.9
CSDE1-211ENST00000525970 RAD51CO43502 376 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 NPIPB7O75200 414 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 HSBP1O75506 76 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 ARG1P05089 322 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 SMIM10L1P0DMW3 83 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 ATF6P18850 670 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 GPR4P46093 362 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 ATP5J2P56134 94 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 GUCA2BQ16661 112 aa3.19□□□□□ -1.9
CSDE1-211ENST00000525970 LRRC10Q5BKY1 277 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms