RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356		A6NJ64	397 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	CENPX	A8MT69	81 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	NPIPA5	E9PKD4	350 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	NDUFAB1	O14561	156 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	AIM2	O14862	343 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SYNGR3	O43761	229 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ZG16	O60844	167 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	FARS2	O95363	451 aa	Known RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	HLA-H	P01893	362 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	IFNW1	P05000	195 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	PRSS2	P07478	247 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	FRMD6-AS1	P0C7T7	363 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	BCKDHA	P12694	445 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	BGN	P21810	368 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ATP5A1	P25705	553 aa	Known RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	GIF	P27352	417 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	HOXD3	P31249	432 aa	Predicted RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	IFNA8	P32881	189 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SAA4	P35542	130 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	PCK1	P35558	622 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ZFP36L2	P47974	494 aa	Known RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	CRISP1	P54107	249 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	UBE2M	P61081	183 aa	Known RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ABCE1	P61221	599 aa	Known RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ILF3	Q12906	894 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	EIF2B1	Q14232	305 aa	Known RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	LAGE3	Q14657	143 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	RAB35	Q15286	201 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	GTDC1	Q4AE62	458 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	C14orf177	Q52M58	125 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SMUG1	Q53HV7	270 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	C8orf82	Q6P1X6	216 aa	Predicted RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	TMPRSS11A	Q6ZMR5	421 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	C9orf139	Q6ZV77	190 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	TSEN54	Q7Z6J9	526 aa	Known RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SFR1	Q86XK3	245 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF100	Q8IYN0	542 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SYS1	Q8N2H4	156 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	OR5T1	Q8NG75	326 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	OR56A4	Q8NGH8	313 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	OR1K1	Q8NGR3	316 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	OR4C3	Q8NH37	302 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	TMEM239	Q8WW34	195 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	CAPSL	Q8WWF8	208 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	CRYGN	Q8WXF5	182 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SMARCD2	Q92925	531 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	MYDGF	Q969H8	173 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	CXorf40B	Q96DE9	158 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	C9orf72	Q96LT7	481 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	ECSIT	Q9BQ95	431 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	NAT9	Q9BTE0	207 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SRR	Q9GZT4	340 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	C1orf198	Q9H425	327 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356		Q9HAA7	133 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	GALP	Q9UBC7	116 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	KIF25	Q9UIL4	384 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	DDX19B	Q9UMR2	479 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	DHRS7	Q9Y394	339 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	URGCP-MRPS24	S4R325	110 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	SPAG17	Q6Q759	2223 aa		3.55	□□□□□ -1.84
PCM1-223	ENST00000524356	PLXNB3	Q9ULL4	1909 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356		A0A087WWV3	80 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF724	A8MTY0	619 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356		H3BMQ9	156 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	MKRN2OS	H3BPM6	223 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356		I3L4J1	428 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SLC1A7	O00341	560 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	EMC8	O43402	210 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	XRCC2	O43543	280 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SNAI2	O43623	268 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	IGHV4-39	P01824	125 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RPSA	P08865	295 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	GATA1	P15976	413 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF12	P17014	697 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RPL35A	P18077	110 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	CSRP1	P21291	193 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SYT1	P21579	422 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	UGT1A3	P35503	534 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	UGT2B10	P36537	528 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	OPRD1	P41143	372 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	PPP1R2	P41236	205 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	CSK	P41240	450 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SLC1A1	P43005	524 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	CX3CR1	P49238	355 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TMED10	P49755	219 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	EMD	P50402	254 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	CHRNB3	Q05901	458 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF33B	Q06732	778 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RBBP4	Q09028	425 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RIPPLY1	Q0D2K3	151 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TMEM187	Q14656	261 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	P2RY6	Q15077	328 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	GABRA6	Q16445	453 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	KYAT1	Q16773	422 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	DUSP7	Q16829	419 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SAMD4B	Q5PRF9	694 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	PPM1L	Q5SGD2	360 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	WDR25	Q64LD2	544 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	PPP1R2P3	Q6NXS1	205 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms